RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Mbd1Q9Z2E2 636 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Vmn2r25W4VSP2 855 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ltbp2O08999 1813 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Srsf11E9Q6E5 511 aaKnown RBP13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ebf3O08791 596 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ccna2P51943 422 aaKnown RBP13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mrgprx2Q3UG50 352 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Bnip1Q6QD59 228 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Olfr1057Q7TR75 315 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Olfr301Q7TS04 311 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gabra5Q8BHJ7 463 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Sun2Q8BJS4 731 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tbc1d19Q8VDV7 526 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Crtc3Q91X84 619 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Snapc2Q91XA5 359 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tnip2Q99JG7 430 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Smad9Q9JIW5 430 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ggps1Q9WTN0 300 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mapk13Q9Z1B7 366 aa13.11□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Drg1P32233 367 aaKnown RBP13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tubgcp3P58854 905 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Agap2Q3UHD9 1186 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Zfp953Q3UPV7 304 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Olfr392Q7TRX6 312 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Slc47a1Q8K0H1 567 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Angel1Q8VCU0 667 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Cyp2c50Q91X77 490 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Chd5A2A8L1 1946 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mindy4b-psA0A1W2P7H6 457 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Pramef20B1ARV6 477 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Elk4P41158 430 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ezh1P70351 747 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Grik5Q61626 979 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Slc26a2Q62273 739 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 C8aQ8K182 587 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Taf12Q8VE65 161 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 MmadhcQ99LS1 296 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Snx2Q9CWK8 519 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Eef1akmt2Q9D853 244 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Limd1Q9QXD8 668 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm45233A0A0N4SVE0 221 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 2610028H24RikG5E8K1 270 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ptpn5P54830 541 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 WhammQ571B6 793 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tmem260Q8BMD6 703 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Bhlhe22Q8C6A8 355 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Calhm4Q8CE93 315 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Chst12Q99LL3 419 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 MydgfQ9CPT4 166 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Pcyox1Q9CQF9 505 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Clvs1Q9D4C9 354 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Akr1c12Q9JLI0 323 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Bcl10Q9Z0H7 233 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 VarsQ9Z1Q9 1263 aaKnown RBP13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm13941A2AJ38 245 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Adgrf2E9Q4J9 644 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Slc1a6O35544 561 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 StamP70297 548 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 P3h1Q3V1T4 739 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 ClmnQ8C5W0 1052 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 ItchQ8C863 864 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Zfp566Q8VCI1 386 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Cdyl2Q9D5D8 503 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Atp13a1Q9EPE9 1200 aaKnown RBP13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tnfrsf10bQ9QZM4 381 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Mpp2Q9WV34 552 aa13.1□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Prdm15E9Q8T2 1174 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm7694J3QNH8 270 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 LmnaP48678 665 aaKnown RBP13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 MipP51180 263 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Otud5Q3U2S4 566 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Hbs1lQ69ZS7 682 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ric8bQ80XE1 520 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Best2Q8BGM5 508 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 NcaphQ8C156 731 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Lin52Q8CD94 116 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 MyocdQ8VIM5 935 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Lrp8Q924X6 996 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ndufa10Q99LC3 355 aaKnown RBP13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Ap4s1Q9WVL1 144 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Vmn2r121A2BE32 847 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 NuggcD3YWJ0 796 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 F830016B08RikG3UWE2 416 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 BhmtO35490 407 aaKnown RBP13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Tpst1O70281 370 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Grpel2O88396 224 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Prim2P33610 505 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Cap1P40124 474 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 ErfP70459 551 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 AurkaP97477 395 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Rbm44Q3V089 1013 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Scube1Q6NZL8 1018 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Gm7247Q6UY52 187 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Lsm8Q6ZWM4 96 aaKnown RBP13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 SybuQ8BHS8 665 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Dhx32Q8BZS9 744 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 4930513O06RikQ9D549 161 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 NfkbizQ9EST8 728 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Txnrd2Q9JLT4 524 aa13.09□□□□□ -0.31
Clcn3-201ENSMUST00000004430 Arl10Q9QXJ4 243 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms