RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Dlc1Q9R0Z9 1092 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 AadatQ9WVM8 425 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 RereQ80TZ9 1558 aa9.4□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 2210011C24RikA0A087WQ89 206 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 FanceB8JJD6 213 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam89aQ14BJ1 175 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Skap2Q3UND0 358 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ttc9Q3V038 219 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Zfp90Q61967 636 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sez6lQ6P1D5 963 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Zbtb39Q6PDK0 712 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Naif1Q6PFD7 327 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Lrrc75bQ7TPD7 306 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gpr101Q80T62 511 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Hmgxb4Q80Y32 594 aaKnown RBP9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Asnsd1Q8BFS9 627 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 TiprlQ8BH58 271 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ckap4Q8BMK4 575 aaKnown RBP9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Parp9Q8CAS9 866 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 AasdhpptQ9CQF6 309 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tktl2Q9D4D4 627 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sept5Q9Z2Q6 369 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 JcadQ5DTX6 1320 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nme9A0A1L1SUL6 329 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ptpn11P35235 597 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gbx2P48031 348 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Plekha7Q3UIL6 1118 aaKnown RBP9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Znf280dQ68FE8 974 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pcdh19Q80TF3 1145 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Trim50Q810I2 483 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 NrcamQ810U4 1256 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ubash3bQ8BGG7 638 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mief1Q8BGV8 463 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ubap1Q8BH48 502 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 SowahdQ8BY98 327 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Prr33Q8C494 260 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cyp2c70Q91W64 489 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mta3Q924K8 591 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Lpin2Q99PI5 893 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 PrameQ9D4Z5 464 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pgam1Q9DBJ1 254 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 QkiQ9QYS9 341 aaKnown RBP9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fads2Q9Z0R9 444 aaKnown RBP9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cdr2lA2A6T1 465 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Lilra5D3Z7A9 295 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ccdc7bE9Q9Y3 381 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ikzf3O08900 507 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 H2-M9O19442 342 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 GcatO88986 416 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pou2f3P31362 431 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Kcnd1Q03719 651 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Adrbk2Q3UYH7 688 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tll1Q62381 1013 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Camta2Q80Y50 1208 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tsen34Q8BMZ5 316 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Amz1Q8BVF9 502 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slx1bQ8BX32 270 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Kctd2Q8CEZ0 266 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Acad9Q8JZN5 625 aaKnown RBP9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Snap47Q8R570 413 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ttc39cQ8VE09 580 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mtif2Q91YJ5 727 aaKnown RBP9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ppp1r16aQ923M0 524 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ergic3Q9CQE7 383 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Znf654Q9DAU9 571 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Drg2Q9QXB9 364 aaKnown RBP9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pkd2l1A2A259 760 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm14781A2A9Q9 366 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm13088A2AGW6 460 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Klhl33G3UW92 533 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm5814J3QP80 125 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Htr3aP23979 487 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Irf5P56477 497 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Psmc6P62334 389 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Otol1Q4ZJM7 482 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nr6a1Q64249 495 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Wee2Q66JT0 555 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Aste1Q8BIR2 672 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cnpy4Q8BQ47 245 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Il31raQ8K5B1 716 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pcdhb16Q91Y03 802 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mapk8Q91Y86 384 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Vangl2Q91ZD4 521 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mettl16Q9CQG2 553 aaKnown RBP9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rnf25Q9QZR0 456 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Map3k6Q9WTR2 1291 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Umodl1Q5DID3 1319 aa9.39□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Prrg1A2BFE8 218 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Zfand4D3Z3C6 739 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Vmn2r104E9Q2J5 860 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm8257E9Q8R3 264 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm5134E9QAB5 671 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 OmdO35103 423 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fgf15O35622 218 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 JchainP01592 159 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nr3c1P06537 783 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rps7P62082 194 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Scn1bP97952 218 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Yy1Q00899 414 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slc38a5Q3U1J0 479 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms