RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 PUS10Q3MIT2 529 aaKnown RBP12.84□□□□□ -0.35
LINC00339-213ENST00000642137 LEXMQ3ZCV2 418 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 CMTM8Q8IZV2 173 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 UBE2Q2Q8WVN8 375 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 BTBD6Q96KE9 485 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 SERPINB11Q96P15 392 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 TBCBQ99426 244 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 KLF16Q9BXK1 252 aaPredicted RBP12.84□□□□□ -0.35
LINC00339-213ENST00000642137 NACA2Q9H009 215 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 TRPC7Q9HCX4 862 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 LZTFL1Q9NQ48 299 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 TRMT1Q9NXH9 659 aaKnown RBP12.84□□□□□ -0.35
LINC00339-213ENST00000642137 TRIM10Q9UDY6 481 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 CDH22Q9UJ99 828 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 CDH7Q9ULB5 785 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 ZKSCAN5Q9Y2L8 839 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 HBS1LQ9Y450 684 aaKnown RBP12.84□□□□□ -0.35
LINC00339-213ENST00000642137 USP15Q9Y4E8 981 aaPredicted RBP12.84□□□□□ -0.35
LINC00339-213ENST00000642137 PAXBP1Q9Y5B6 917 aa12.84□□□□□ -0.35
LINC00339-213ENST00000642137 ZFP37Q9Y6Q3 630 aaPredicted RBP12.84□□□□□ -0.35
LINC00339-213ENST00000642137 SLC12A8A0AV02 714 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 GRXCR2A6NFK2 248 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 MDM4O15151 490 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 IRAK2O43187 625 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 TCF3P15923 654 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 TFE3P19532 575 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-213ENST00000642137 MAN1A1P33908 653 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 AVPR1AP37288 418 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 SLC1A1P43005 524 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 PITX1P78337 314 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-213ENST00000642137 ATP11AP98196 1134 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 ZNF252P-AS1Q0IIN9 211 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 CBX2Q14781 532 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-213ENST00000642137 TRIP4Q15650 581 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-213ENST00000642137 CLUL1Q15846 466 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 C15orf59Q2T9L4 293 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-213ENST00000642137 STXBP5Q5T5C0 1151 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 POTEHQ6S545 545 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 SND1Q7KZF4 910 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00339-213ENST00000642137 TAC4Q86UU9 113 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 MAFAQ8NHW3 353 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-213ENST00000642137 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.83□□□□□ -0.36
LINC00339-213ENST00000642137 FAM172AQ8WUF8 416 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 FGF13Q92913 245 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 SLC39A13Q96H72 371 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 ZSWIM3Q96MP5 696 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 ADAM33Q9BZ11 813 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 POMKQ9H5K3 350 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00339-213ENST00000642137 RASAL2Q9UJF2 1139 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 TLR6Q9Y2C9 796 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 ALG6Q9Y672 507 aa12.83□□□□□ -0.36
LINC00339-213ENST00000642137 MACROD2A1Z1Q3 448 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 BUB1BO60566 1050 aaPredicted RBP12.82□□□□□ -0.36
LINC00339-213ENST00000642137 MOCS3O95396 460 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 SLC2A3P11169 496 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 RDXP35241 583 aaKnown RBP12.82□□□□□ -0.36
LINC00339-213ENST00000642137 PCK1P35558 622 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 CXCR3P49682 368 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 HDAC4P56524 1084 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 TBX4P57082 545 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 RING1Q06587 406 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 MTA1Q13330 715 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 CDO1Q16878 200 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 SH3PXD2AQ5TCZ1 1133 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 OTUD1Q5VV17 481 aaPredicted RBP12.82□□□□□ -0.36
LINC00339-213ENST00000642137 C11orf63Q6NUN7 778 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 CC2D1AQ6P1N0 951 aaPredicted RBP12.82□□□□□ -0.36
LINC00339-213ENST00000642137 GET4Q7L5D6 327 aaPredicted RBP12.82□□□□□ -0.36
LINC00339-213ENST00000642137 SLFN11Q7Z7L1 901 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 MIB1Q86YT6 1006 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 ARID3BQ8IVW6 561 aaPredicted RBP12.82□□□□□ -0.36
LINC00339-213ENST00000642137 UNC45BQ8IWX7 931 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 NPAS3Q8IXF0 933 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 SYCE1Q8N0S2 351 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 ARFGAP1Q8N6T3 406 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 ADAM32Q8TC27 787 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 ING5Q8WYH8 240 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 AZIN2Q96A70 460 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 PLD4Q96BZ4 506 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 SLITRK6Q9H5Y7 841 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 WDCPQ9H6R7 721 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 FAM204AQ9H8W3 233 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 TRPV4Q9HBA0 871 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 TDP1Q9NUW8 608 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 DDIT4Q9NX09 232 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.82□□□□□ -0.36
LINC00339-213ENST00000642137 CALCOCO1Q9P1Z2 691 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 ARHGAP26Q9UNA1 814 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 USTQ9Y2C2 406 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 CPQQ9Y646 472 aa12.82□□□□□ -0.36
LINC00339-213ENST00000642137 DENND4AQ7Z401 1863 aa12.81□□□□□ -0.36
LINC00339-213ENST00000642137 USP27XA6NNY8 438 aa12.81□□□□□ -0.36
LINC00339-213ENST00000642137 IGLV3-27P01718 113 aa12.81□□□□□ -0.36
LINC00339-213ENST00000642137 CKMP06732 381 aa12.81□□□□□ -0.36
LINC00339-213ENST00000642137 LAMP2P13473 410 aa12.81□□□□□ -0.36
LINC00339-213ENST00000642137 CCR1P32246 355 aa12.81□□□□□ -0.36
LINC00339-213ENST00000642137 AIF1P55008 147 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms