RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 SKOR1P84550 965 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 DHX9Q08211 1270 aaKnown RBP10.71□□□□□ -0.69
PHGDH-224ENST00000641711 ZNF252P-AS1Q0IIN9 211 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 ZNF268Q14587 947 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-224ENST00000641711 CCDC85BQ15834 202 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-224ENST00000641711 CCNG2Q16589 344 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 PTPN20Q4JDL3 420 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 ZNF394Q53GI3 561 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 SGO2Q562F6 1265 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 TTMPQ5BVD1 217 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 MDH1BQ5I0G3 518 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 FAM35AQ86V20 835 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 LRRTM3Q86VH5 581 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 CCDC105Q8IYK2 499 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 GRK7Q8WTQ7 553 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 SUSD6Q92537 303 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 ART4Q93070 314 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 ARL8AQ96BM9 186 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 PCED1BQ96HM7 432 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 DOCK6Q96HP0 2047 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 RBM41Q96IZ5 413 aaKnown RBP10.71□□□□□ -0.69
PHGDH-224ENST00000641711 SPATA17Q96L03 361 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 TMEM209Q96SK2 561 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 HNRNPABQ99729 332 aaKnown RBP10.71□□□□□ -0.69
PHGDH-224ENST00000641711 OSBPL8Q9BZF1 889 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 S1PR5Q9H228 398 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 TMBIM4Q9HC24 238 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 ABI2Q9NYB9 513 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-224ENST00000641711 WHRNQ9P202 907 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 MTRF1LQ9UGC7 380 aaKnown RBP10.71□□□□□ -0.69
PHGDH-224ENST00000641711 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.71□□□□□ -0.69
PHGDH-224ENST00000641711 PLAAQ9Y263 795 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 SNX24Q9Y343 169 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 NEU2Q9Y3R4 380 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 NME7Q9Y5B8 376 aa10.71□□□□□ -0.69
PHGDH-224ENST00000641711 NOTCH4Q99466 2003 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 OBSL1O75147 1896 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 CLUHO75153 1309 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 MYBPHLA2RUH7 354 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 HMGB1P1B2RPK0 211 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 O00370 1275 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 MBTPS2O43462 519 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 MICAL2O94851 1124 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 SEC24AO95486 1093 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 NUDT17P0C025 328 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 CSH1P0DML2 217 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 CSH2P0DML3 217 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 RALAP11233 206 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 LMAN1P49257 510 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 EPHA5P54756 1037 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 EIF3BP55884 814 aaKnown RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 SLC8A3P57103 927 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 PSMC1P62191 440 aaKnown RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 MRPS5P82675 430 aaKnown RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 OGDHQ02218 1023 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 DUSP4Q13115 394 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 PTK6Q13882 451 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 ATAT1Q5SQI0 421 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 DRICH1Q6PGQ1 229 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 DCUN1D2Q6PH85 259 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 POLNQ7Z5Q5 900 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 ACOT1Q86TX2 421 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 ATAD1Q8NBU5 361 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 ATL2Q8NHH9 583 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 PPM1EQ8WY54 764 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 SMG7Q92540 1137 aaKnown RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 PSMG2Q969U7 264 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 ZNF707Q96C28 371 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 MCRS1Q96EZ8 462 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 TRMT2BQ96GJ1 504 aaKnown RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 ATP6V1G3Q96LB4 118 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 C8orf48Q96LL4 319 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 TWNKQ96RR1 684 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 HERPUD2Q9BSE4 406 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 MIS12Q9H081 205 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 DMAP1Q9NPF5 467 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 COMMD8Q9NX08 183 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 DDX56Q9NY93 547 aaKnown RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 UXTQ9UBK9 157 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-224ENST00000641711 PRKAG3Q9UGI9 489 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 EFR3BQ9Y2G0 817 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 TTC28Q96AY4 2481 aa10.7□□□□□ -0.7
PHGDH-224ENST00000641711 CCDC195A0A1B0GUA6 201 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 SOBPA7XYQ1 873 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 ZNF197O14709 1029 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 GJB6O95452 261 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 GAS8O95995 478 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 KRT14P02533 472 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 FAM200BP0CF97 657 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 SETSIPP0DME0 302 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 KRT3P12035 628 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 ITIH2P19823 946 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 GPD2P43304 727 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 KCNJ1P48048 391 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 BCAT1P54687 386 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 PLTPP55058 493 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 CAV1Q03135 178 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 DLX2Q07687 328 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-224ENST00000641711 ZNF844Q08AG5 666 aa10.69□□□□□ -0.7
PHGDH-224ENST00000641711 TWF1Q12792 350 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms