RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 PPP1R37O75864 691 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 MBD3O95983 291 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 ZDHHC11BP0C7U3 371 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 WARSP23381 471 aaKnown RBP10.27□□□□□ -0.77
PHGDH-212ENST00000641247 YWHAQP27348 245 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 CTSKP43235 329 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 NASPP49321 788 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-212ENST00000641247 DGKGP49619 791 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 UBE2HP62256 183 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 RBP5P82980 135 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 PDE4CQ08493 712 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 KCNH2Q12809 1159 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 GEN1Q17RS7 908 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 KLHL40Q2TBA0 621 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 RILPL1Q5EBL4 403 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 HECTD3Q5T447 861 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 HES3Q5TGS1 186 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 SNX30Q5VWJ9 437 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 FBXL19Q6PCT2 694 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 SASS6Q6UVJ0 657 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 PAQR9Q6ZVX9 377 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 HTR3DQ70Z44 454 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 DPH6Q7L8W6 267 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 HS2ST1Q7LGA3 356 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 ZNF720Q7Z2F6 126 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 NUP93Q8N1F7 819 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 RBBP8NLQ8NC74 664 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-212ENST00000641247 FBXO32Q969P5 355 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 SIPA1Q96FS4 1042 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 TMEM176AQ96HP8 235 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 NAF1Q96HR8 494 aaKnown RBP10.27□□□□□ -0.77
PHGDH-212ENST00000641247 SLITRK1Q96PX8 696 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 NUP58Q9BVL2 599 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 KLF16Q9BXK1 252 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-212ENST00000641247 NRSN2Q9GZP1 204 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 IL37Q9NZH6 218 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 MARK1Q9P0L2 795 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 THAP10Q9P2Z0 257 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-212ENST00000641247 FTSJ1Q9UET6 329 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 CCDC39Q9UFE4 941 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 NOL7Q9UMY1 257 aaKnown RBP10.27□□□□□ -0.77
PHGDH-212ENST00000641247 PCDHGA1Q9Y5H4 931 aa10.27□□□□□ -0.77
PHGDH-212ENST00000641247 COL5A1P20908 1838 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-212ENST00000641247 GOLGA4Q13439 2230 aaKnown RBP10.27□□□□□ -0.77
PHGDH-212ENST00000641247 MYO18AQ92614 2054 aaKnown RBP10.27□□□□□ -0.77
PHGDH-212ENST00000641247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-212ENST00000641247 VWA3AA6NCI4 1184 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 ENC1O14682 589 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 GADD45BO75293 160 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-212ENST00000641247 YEATS4O95619 227 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 CST3P01034 146 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-212ENST00000641247 WNT1P04628 370 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 PTPN1P18031 435 aaKnown RBP10.26□□□□□ -0.77
PHGDH-212ENST00000641247 PRKCHP24723 683 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 OXTRP30559 389 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 ACADVLP49748 655 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 CCT8P50990 548 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 AFF3P51826 1226 aaKnown RBP10.26□□□□□ -0.77
PHGDH-212ENST00000641247 CEBPZQ03701 1054 aaKnown RBP10.26□□□□□ -0.77
PHGDH-212ENST00000641247 PREPLQ4J6C6 727 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-212ENST00000641247 ARHGAP40Q5TG30 622 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 NUDT18Q6ZVK8 323 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 SORCS1Q8WY21 1168 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 SNX19Q92543 992 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 TTC9Q92623 222 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 IGSF8Q969P0 613 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 BIRC7Q96CA5 298 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 HPDLQ96IR7 371 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 XPO6Q96QU8 1125 aaKnown RBP10.26□□□□□ -0.77
PHGDH-212ENST00000641247 ARID3AQ99856 593 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 FGFBP2Q9BYJ0 223 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 ST6GALNAC4Q9H4F1 302 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 EBF2Q9HAK2 575 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 OSER1Q9NX31 292 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 ITGA11Q9UKX5 1188 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-212ENST00000641247 CLIC4Q9Y696 253 aa10.26□□□□□ -0.77
PHGDH-212ENST00000641247 A0A1B0GTQ1 180 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 LAD1O00515 517 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 WNT9AO14904 365 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 PAPSS1O43252 624 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-212ENST00000641247 TSPAN3O60637 253 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 BEST1O76090 585 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 GNL1P36915 607 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-212ENST00000641247 MFAP3P55082 362 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 GRIN1Q05586 938 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 DMTNQ08495 405 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 SLC39A14Q15043 492 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 STK38Q15208 465 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 PKDCCQ504Y2 493 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 COLEC12Q5KU26 742 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 TMEM215Q68D42 235 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 KCTD17Q8N5Z5 321 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 LINC00301Q8NCQ3 95 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 GPT2Q8TD30 523 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 SAP25Q8TEE9 199 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 CACTINQ8WUQ7 758 aaKnown RBP10.25□□□□□ -0.77
PHGDH-212ENST00000641247 BAP1Q92560 729 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 TSC1Q92574 1164 aa10.25□□□□□ -0.77
PHGDH-212ENST00000641247 PRCCQ92733 491 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms