RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 TRUB2O95900 331 aaKnown RBP9.51□□□□□ -0.89
SCARB2-225ENST00000640900 TBX18O95935 607 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 RALAP11233 206 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 NCAM1P13591 858 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 SLC1A1P43005 524 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 NTHL1P78549 312 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 ZXDBP98169 803 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 RING1Q06587 406 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 TRIP4Q15650 581 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-225ENST00000640900 RAB6CQ53S08 254 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 SH3PXD2AQ5TCZ1 1133 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 BTBD8Q5XKL5 378 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 DCUN1D2Q6PH85 259 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 NYAP1Q6ZVC0 841 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 PDZD4Q76G19 769 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-225ENST00000640900 TAC4Q86UU9 113 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 ITFG1Q8TB96 612 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 EDEM1Q92611 657 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 BTBD6Q96KE9 485 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 CFAP57Q96MR6 1250 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 SLC22A12Q96S37 553 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 TBCBQ99426 244 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 NCAPGQ9BPX3 1015 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 KLF16Q9BXK1 252 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-225ENST00000640900 SLC46A2Q9BY10 475 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 IRX2Q9BZI1 471 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-225ENST00000640900 RAB6CQ9H0N0 254 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 TASP1Q9H6P5 420 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 UBE2ZQ9H832 354 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-225ENST00000640900 TRPV4Q9HBA0 871 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 CLDND1Q9NY35 253 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 DNMT3LQ9UJW3 386 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 HBS1LQ9Y450 684 aaKnown RBP9.51□□□□□ -0.89
SCARB2-225ENST00000640900 PAXBP1Q9Y5B6 917 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 ALG6Q9Y672 507 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 CAPN6Q9Y6Q1 641 aa9.51□□□□□ -0.89
SCARB2-225ENST00000640900 MACROD2A1Z1Q3 448 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 GFRA2O00451 464 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 FANCGO15287 622 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 BUB1O43683 1085 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 MOCS3O95396 460 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 CEBPBP17676 345 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 SDC4P31431 198 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 ATP5C1P36542 298 aaKnown RBP9.5□□□□□ -0.89
SCARB2-225ENST00000640900 MTHFRP42898 656 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 RNASE9P60153 205 aaKnown RBP9.5□□□□□ -0.89
SCARB2-225ENST00000640900 SLC25A11Q02978 314 aaKnown RBP9.5□□□□□ -0.89
SCARB2-225ENST00000640900 SCAPQ12770 1279 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 IFRD2Q12894 506 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-225ENST00000640900 PPP2R5DQ14738 602 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 TEAD2Q15562 447 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 TAF12Q16514 161 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 IFI16Q16666 785 aaKnown RBP9.5□□□□□ -0.89
SCARB2-225ENST00000640900 C15orf59Q2T9L4 293 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-225ENST00000640900 ATAT1Q5SQI0 421 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 STXBP5Q5T5C0 1151 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 LRRC38Q5VT99 294 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 TXNDC8Q6A555 127 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 TADA2BQ86TJ2 420 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 NT5DC3Q86UY8 548 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 ZSCAN30Q86W11 494 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 CPNE8Q86YQ8 564 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 NPAS3Q8IXF0 933 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 FAM71BQ8TC56 605 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 MRPS31Q92665 395 aaKnown RBP9.5□□□□□ -0.89
SCARB2-225ENST00000640900 AZIN2Q96A70 460 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 NTAN1Q96AB6 310 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 TRIM44Q96DX7 344 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-225ENST00000640900 FCRL2Q96LA5 508 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-225ENST00000640900 ZSWIM3Q96MP5 696 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 NECTIN4Q96NY8 510 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 ATXN3LQ9H3M9 355 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 LZTFL1Q9NQ48 299 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 PIGVQ9NUD9 493 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 TRMT1Q9NXH9 659 aaKnown RBP9.5□□□□□ -0.89
SCARB2-225ENST00000640900 ARHGEF38Q9NXL2 777 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 GDE1Q9NZC3 331 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 MARCH2Q9P0N8 246 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 CD207Q9UJ71 328 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 CDH22Q9UJ99 828 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 STOML2Q9UJZ1 356 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 STAP1Q9ULZ2 295 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 GUCA1BQ9UMX6 200 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 ARHGAP26Q9UNA1 814 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 TLR6Q9Y2C9 796 aa9.5□□□□□ -0.89
SCARB2-225ENST00000640900 GRXCR2A6NFK2 248 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 M0QYT0 321 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 F9P00740 461 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 MYL4P12829 197 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 FOSL2P15408 326 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 TCF4P15884 667 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 GJA1P17302 382 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 HDCP19113 662 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 COMTP21964 271 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 FSHRP23945 695 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 PSMA2P25787 234 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 IL1R2P27930 398 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 MIPP30301 263 aa9.49□□□□□ -0.89
SCARB2-225ENST00000640900 RDXP35241 583 aaKnown RBP9.49□□□□□ -0.89
SCARB2-225ENST00000640900 PEX5P50542 639 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms