RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 KRT7P08729 469 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 SRGAP2BP0DMP2 458 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 POU3F3P20264 500 aaPredicted RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 IGFBP4P22692 258 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 IL1R2P27930 398 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 CXCR5P32302 372 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 MARCKSL1P49006 195 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 HDAC4P56524 1084 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 RWDD2BP57060 319 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 ADGRE1Q14246 886 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 SMTNL2Q2TAL5 461 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 ODF2Q5BJF6 829 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 KCNT1Q5JUK3 1230 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 LRRC38Q5VT99 294 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 OTUD1Q5VV17 481 aaPredicted RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 SNX30Q5VWJ9 437 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 PAPD7Q5XG87 772 aaKnown RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 MSANTD2Q6P1R3 559 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 TMC5Q6UXY8 1006 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 PDZD4Q76G19 769 aaPredicted RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 GRASPQ7Z6J2 395 aaPredicted RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 TMEM150AQ86TG1 271 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 FAM131BQ86XD5 332 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 MIB1Q86YT6 1006 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 TMC8Q8IU68 726 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 HSPH1Q92598 858 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 MRPS31Q92665 395 aaKnown RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 ACSF2Q96CM8 615 aaPredicted RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 PGAP3Q96FM1 320 aaPredicted RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 SERPINB11Q96P15 392 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 CDK5RAP1Q96SZ6 601 aaKnown RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 LRRC3Q9BY71 257 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 ADAM33Q9BZ11 813 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 ATXN3LQ9H3M9 355 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 SMOC2Q9H3U7 446 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 SFXN1Q9H9B4 322 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 TRPC7Q9HCX4 862 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 RRAGDQ9NQL2 400 aaPredicted RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 PIGVQ9NUD9 493 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 DZANK1Q9NVP4 752 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 MARCH2Q9P0N8 246 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 CALCOCO1Q9P1Z2 691 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 DNMT3BQ9UBC3 853 aaKnown RBP9.13□□□□□ -0.95
HLA-B-258ENST00000640615 DNMT3LQ9UJW3 386 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 SNX12Q9UMY4 172 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 SAR1BQ9Y6B6 198 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 PTPRDP23468 1912 aa9.13□□□□□ -0.95
HLA-B-258ENST00000640615 MYH10P35580 1976 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 A0A1W2PRU2 124 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 SLC12A8A0AV02 714 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 C2orf78A6NCI8 922 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 TNFRSF10AO00220 468 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 LINC01565O15544 149 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 MSI1O43347 362 aaKnown RBP9.12□□□□□ -0.95
HLA-B-258ENST00000640615 COCHO43405 550 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 SRGAP2O75044 1071 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 TADA3O75528 432 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 FGF19O95750 216 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 KRT1P04264 644 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 HMBSP08397 361 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 POU2F2P09086 479 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 RARAP10276 462 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 PRLRP16471 622 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 GJA1P17302 382 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 TCP1P17987 556 aaKnown RBP9.12□□□□□ -0.95
HLA-B-258ENST00000640615 CDC25CP30307 473 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 ATP5C1P36542 298 aaKnown RBP9.12□□□□□ -0.95
HLA-B-258ENST00000640615 CXCR3P49682 368 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 PEX5P50542 639 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 TBX4P57082 545 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 NTHL1P78549 312 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 CYP4F8P98187 520 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 SLC25A11Q02978 314 aaKnown RBP9.12□□□□□ -0.95
HLA-B-258ENST00000640615 ZNF211Q13398 564 aaPredicted RBP9.12□□□□□ -0.95
HLA-B-258ENST00000640615 KCNC3Q14003 757 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 ATP13A4Q4VNC1 1196 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 BOLA3Q53S33 107 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
HLA-B-258ENST00000640615 RARS2Q5T160 578 aaKnown RBP9.12□□□□□ -0.95
HLA-B-258ENST00000640615 TXNRD3NBQ6F5E7 133 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 TMEM184AQ6ZMB5 413 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 EP400NLQ6ZTU2 488 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 GAREM2Q75VX8 874 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 BNIPLQ7Z465 357 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 POLNQ7Z5Q5 900 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 MICALL1Q8N3F8 863 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 ZNF276Q8N554 614 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 EFHBQ8N7U6 833 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 LEMD2Q8NC56 503 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 KCTD6Q8NC69 237 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 SMG7Q92540 1137 aaKnown RBP9.12□□□□□ -0.95
HLA-B-258ENST00000640615 ALG3Q92685 438 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 ZNF707Q96C28 371 aaPredicted RBP9.12□□□□□ -0.95
HLA-B-258ENST00000640615 ASB2Q96Q27 587 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 PEBP4Q96S96 227 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 OSBPL9Q96SU4 736 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 APOL5Q9BWW9 433 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 WDCPQ9H6R7 721 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 KLHL11Q9NVR0 708 aa9.12□□□□□ -0.95
HLA-B-258ENST00000640615 DDX56Q9NY93 547 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms