RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 PAPOLBQ9NRJ5 636 aaKnown RBP4.16□□□□□ -1.74
AP3S1-209ENST00000640413 VPS45Q9NRW7 570 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 GABBR1Q9UBS5 961 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 HEMK1Q9Y5R4 338 aaPredicted RBP4.16□□□□□ -1.74
AP3S1-209ENST00000640413 SPATA31A1Q5TZJ5 1347 aa4.16□□□□□ -1.74
AP3S1-209ENST00000640413 H0YGN5 161 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 USP12O75317 370 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 OFD1O75665 1012 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 RASSF9O75901 435 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 ACAA1P09110 424 aaPredicted RBP4.15□□□□□ -1.75
AP3S1-209ENST00000640413 PF4V1P10720 104 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 IBSPP21815 317 aaPredicted RBP4.15□□□□□ -1.75
AP3S1-209ENST00000640413 ENTPD1P49961 510 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 WDR5P61964 334 aaKnown RBP4.15□□□□□ -1.75
AP3S1-209ENST00000640413 CCDC15Q0P6D6 951 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 ST3GAL2Q16842 350 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 IFIT1BQ5T764 474 aaKnown RBP4.15□□□□□ -1.75
AP3S1-209ENST00000640413 CLEC9AQ6UXN8 241 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 RBM23Q86U06 439 aaKnown RBP4.15□□□□□ -1.75
AP3S1-209ENST00000640413 PPP1R35Q8TAP8 253 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 TMEM255BQ8WV15 326 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 SLC12A5Q9H2X9 1139 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 THSD1Q9NS62 852 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 HOMER2Q9NSB8 354 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 STEAP1Q9UHE8 339 aa4.15□□□□□ -1.75
AP3S1-209ENST00000640413 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 CCP110O43303 1012 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 UBXN7O94888 489 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 VCAM1P19320 739 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 EN2P19622 333 aaPredicted RBP4.14□□□□□ -1.75
AP3S1-209ENST00000640413 EIF4A1P60842 406 aaKnown RBP4.14□□□□□ -1.75
AP3S1-209ENST00000640413 PTPROQ16827 1216 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 NADSYN1Q6IA69 706 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 TRILQ7L0X0 811 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 TRAPPC11Q7Z392 1133 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 ZBTB46Q86UZ6 589 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 MICU3Q86XE3 530 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 DENND1CQ8IV53 801 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 LMO3Q8TAP4 145 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 NUP88Q99567 741 aaPredicted RBP4.14□□□□□ -1.75
AP3S1-209ENST00000640413 SF3B5Q9BWJ5 86 aaKnown RBP4.14□□□□□ -1.75
AP3S1-209ENST00000640413 SAP30LQ9HAJ7 183 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 ATP6V0A4Q9HBG4 840 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 FZD3Q9NPG1 666 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 CD93Q9NPY3 652 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 PLSCR4Q9NRQ2 329 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 IP6K2Q9UHH9 426 aa4.14□□□□□ -1.75
AP3S1-209ENST00000640413 AGO2Q9UKV8 859 aaKnown RBP4.14□□□□□ -1.75
AP3S1-209ENST00000640413 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.13□□□□□ -1.75
AP3S1-209ENST00000640413 ANKRD62A6NC57 917 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 PYCARD-AS1I3L0S3 204 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 NTN3O00634 580 aaPredicted RBP4.13□□□□□ -1.75
AP3S1-209ENST00000640413 TBX3O15119 743 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 LINC01565O15544 149 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 PHGDHO43175 533 aaKnown RBP4.13□□□□□ -1.75
AP3S1-209ENST00000640413 TMIGD3P0DMS9 266 aaPredicted RBP4.13□□□□□ -1.75
AP3S1-209ENST00000640413 YY1P25490 414 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 SLC7A1P30825 629 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 VPS41P49754 854 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 AGFG1P52594 562 aaKnown RBP4.13□□□□□ -1.75
AP3S1-209ENST00000640413 ARHGEF7Q14155 803 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 SMTNL2Q2TAL5 461 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 GRHL2Q6ISB3 625 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 SLC39A5Q6ZMH5 540 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 P3H2Q8IVL5 708 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 IL31RAQ8NI17 732 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 P2RY11Q96G91 374 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 HIST1H2AAQ96QV6 131 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 CINPQ9BW66 212 aaPredicted RBP4.13□□□□□ -1.75
AP3S1-209ENST00000640413 GATA5Q9BWX5 397 aaPredicted RBP4.13□□□□□ -1.75
AP3S1-209ENST00000640413 STK31Q9BXU1 1019 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 SACM1LQ9NTJ5 587 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 VPS4AQ9UN37 437 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 SLC27A6Q9Y2P4 619 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 INSL5Q9Y5Q6 135 aa4.13□□□□□ -1.75
AP3S1-209ENST00000640413 MBD3L4A6NDZ8 208 aaPredicted RBP4.12□□□□□ -1.75
AP3S1-209ENST00000640413 MBD3L3A6NE82 208 aaPredicted RBP4.12□□□□□ -1.75
AP3S1-209ENST00000640413 A6NNC1 897 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 RAB27BO00194 218 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 PRPF4O43172 522 aaKnown RBP eCLIP4.12□□□□□ -1.75
AP3S1-209ENST00000640413 ZNF432O94892 652 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 PLGP00747 810 aaPredicted RBP4.12□□□□□ -1.75
AP3S1-209ENST00000640413 CHRNB1P11230 501 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 TFEBP19484 476 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 GAS1P54826 345 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 RAE1P78406 368 aaKnown RBP4.12□□□□□ -1.75
AP3S1-209ENST00000640413 SLC4A8Q2Y0W8 1093 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 BRDTQ58F21 947 aaPredicted RBP4.12□□□□□ -1.75
AP3S1-209ENST00000640413 TTLL5Q6EMB2 1281 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 EME1Q96AY2 570 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 CHMP4CQ96CF2 233 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 TCF7L1Q9HCS4 588 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 STK32BQ9NY57 414 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 HDAC9Q9UKV0 1011 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 ANKRD6Q9Y2G4 727 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 USP19O94966 1318 aa4.12□□□□□ -1.75
AP3S1-209ENST00000640413 FAM227AF5H4B4 570 aa4.11□□□□□ -1.75
AP3S1-209ENST00000640413 H3BML4 177 aa4.11□□□□□ -1.75
AP3S1-209ENST00000640413 TMEM225BP0DP42 221 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms