RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 SIPA1Q96FS4 1042 aa15.8■□□□□ 0.12
SYNE2-228ENST00000639659 DUSP9Q99956 384 aaKnown RBP15.8■□□□□ 0.12
SYNE2-228ENST00000639659 C7orf25Q9BPX7 421 aa15.8■□□□□ 0.12
SYNE2-228ENST00000639659 ZDHHC5Q9C0B5 715 aa15.8■□□□□ 0.12
SYNE2-228ENST00000639659 MKRN2Q9H000 416 aaKnown RBP15.8■□□□□ 0.12
SYNE2-228ENST00000639659 ZSCAN16Q9H4T2 348 aaPredicted RBP15.8■□□□□ 0.12
SYNE2-228ENST00000639659 VRTNQ9H8Y1 702 aa15.8■□□□□ 0.12
SYNE2-228ENST00000639659 CYLDQ9NQC7 956 aa15.8■□□□□ 0.12
SYNE2-228ENST00000639659 WSB2Q9NYS7 404 aaPredicted RBP15.8■□□□□ 0.12
SYNE2-228ENST00000639659 SCML2Q9UQR0 700 aa15.8■□□□□ 0.12
SYNE2-228ENST00000639659 RAXQ9Y2V3 346 aa15.8■□□□□ 0.12
SYNE2-228ENST00000639659 FAM221BA6H8Z2 402 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 KCNJ18B7U540 433 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 GFRA2O00451 464 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 STC2O76061 302 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 CER1O95813 267 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 C4BPAP04003 597 aaKnown RBP15.79■□□□□ 0.12
SYNE2-228ENST00000639659 CD58P19256 250 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 MATKP42679 507 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 PLA2G4AP47712 749 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 AP3M2P53677 418 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 ARID5AQ03989 594 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 EFEMP1Q12805 493 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 CUL4BQ13620 913 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 GEN1Q17RS7 908 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 SGSM1Q2NKQ1 1148 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 SHC4Q6S5L8 630 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 CLEC20AQ6ZU45 233 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 MARCH9Q86YJ5 346 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 PRCCQ92733 491 aaPredicted RBP15.79■□□□□ 0.12
SYNE2-228ENST00000639659 TWNKQ96RR1 684 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 CIPCQ9C0C6 399 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 CSNK1G1Q9HCP0 422 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 TM7SF3Q9NS93 570 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.79■□□□□ 0.12
SYNE2-228ENST00000639659 CGNQ9P2M7 1197 aaKnown RBP15.79■□□□□ 0.12
SYNE2-228ENST00000639659 EIF2B4Q9UI10 523 aaKnown RBP15.79■□□□□ 0.12
SYNE2-228ENST00000639659 PCOLCE2Q9UKZ9 415 aa15.79■□□□□ 0.12
SYNE2-228ENST00000639659 FNDC3AQ9Y2H6 1198 aaKnown RBP15.79■□□□□ 0.12
SYNE2-228ENST00000639659 PLXNB3Q9ULL4 1909 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 BCAT2O15382 392 aaPredicted RBP15.78■□□□□ 0.12
SYNE2-228ENST00000639659 STX6O43752 255 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 CUTAO60888 179 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 CILPO75339 1184 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 RALAP11233 206 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 CORO1AP31146 461 aaKnown RBP15.78■□□□□ 0.12
SYNE2-228ENST00000639659 TPMTP51580 245 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 MFAP3P55082 362 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 BMT2Q1RMZ1 405 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 CEP135Q66GS9 1140 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 CCNI2Q6ZMN8 369 aaPredicted RBP15.78■□□□□ 0.12
SYNE2-228ENST00000639659 Q6ZNB5 142 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 TMPRSS6Q8IU80 811 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 C12orf56Q8IXR9 622 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 GOLGA5Q8TBA6 731 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 SORCS1Q8WY21 1168 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 CYFIP2Q96F07 1278 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 P2RY11Q96G91 374 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 LRIG1Q96JA1 1093 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 ZNF396Q96N95 335 aaPredicted RBP15.78■□□□□ 0.12
SYNE2-228ENST00000639659 MMRN2Q9H8L6 949 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 USP36Q9P275 1121 aaKnown RBP15.78■□□□□ 0.12
SYNE2-228ENST00000639659 PCDHA5Q9Y5H7 936 aa15.78■□□□□ 0.12
SYNE2-228ENST00000639659 MORC2Q9Y6X9 1032 aaPredicted RBP15.78■□□□□ 0.12
SYNE2-228ENST00000639659 A0A1B0GVT2 93 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 EIF4E1BA6NMX2 242 aaKnown RBP15.77■□□□□ 0.12
SYNE2-228ENST00000639659 HHLA1C9JL84 531 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 PPP6R2O75170 966 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 HLA-DRAP01903 254 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 CAPNS1P04632 268 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 EPHX1P07099 455 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 PRKCHP24723 683 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 ASPAP45381 313 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 EHHADHQ08426 723 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 ZNF234Q14588 700 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 HLA-BQ31612 363 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 ANKS1BQ7Z6G8 1248 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 TADA2BQ86TJ2 420 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 UNC93AQ86WB7 457 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 CRYBG2Q8N1P7 616 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 RHBDD1Q8TEB9 315 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 IMPG2Q9BZV3 1241 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 MAGEF1Q9HAY2 307 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 EXOC1Q9NV70 894 aa15.77■□□□□ 0.12
SYNE2-228ENST00000639659 THAP10Q9P2Z0 257 aaPredicted RBP15.77■□□□□ 0.12
SYNE2-228ENST00000639659 PTPRBP23467 1997 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 CBFA2T3O75081 653 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 KLKB1P03952 638 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 CYBBP04839 570 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 ATXN1LP0C7T5 689 aaKnown RBP15.76■□□□□ 0.11
SYNE2-228ENST00000639659 HLA-EP13747 358 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 OXTRP30559 389 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 CSNK1EP49674 416 aaKnown RBP15.76■□□□□ 0.11
SYNE2-228ENST00000639659 ZNF394Q53GI3 561 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 SOWAHCQ53LP3 525 aaPredicted RBP15.76■□□□□ 0.11
SYNE2-228ENST00000639659 FYB2Q5VWT5 728 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 CNNM4Q6P4Q7 775 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 SERPINA13PQ6UXR4 307 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 SV2AQ7L0J3 742 aa15.76■□□□□ 0.11
SYNE2-228ENST00000639659 RSRC2Q7L4I2 434 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms