RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 ZNF507Q8TCN5 953 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 NOC3LQ8WTT2 800 aaKnown RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 HMGB4Q8WW32 186 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 RLN3Q8WXF3 142 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 FBXO32Q969P5 355 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 SYAP1Q96A49 352 aaPredicted RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 SMARCD1Q96GM5 515 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 CLIC6Q96NY7 704 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 TRIM9Q9C026 710 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 ZNF518BQ9C0D4 1074 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 LRRC27Q9C0I9 530 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 XYLT2Q9H1B5 865 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 SNX25Q9H3E2 840 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 DPEP3Q9H4B8 488 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 MAGEF1Q9HAY2 307 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 CD248Q9HCU0 757 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 DMAP1Q9NPF5 467 aaPredicted RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 METTL5Q9NRN9 209 aaKnown RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 TMEM74BQ9NUR3 256 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 COMMD8Q9NX08 183 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 SMPD4Q9NXE4 827 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 PGPEP1Q9NXJ5 209 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 MARK1Q9P0L2 795 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 CALCOCO1Q9P1Z2 691 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 STIM2Q9P246 746 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 CGNQ9P2M7 1197 aaKnown RBP5.82□□□□□ -1.48
PDE4D-229ENST00000638939 MSRB2Q9Y3D2 182 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 STARD13Q9Y3M8 1113 aa5.82□□□□□ -1.48
PDE4D-229ENST00000638939 ATXN2Q99700 1313 aaKnown RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 ASH1LQ9NR48 2969 aaKnown RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 IGHV1OR15-9A0A0B4J2B8 117 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 A0A1W2PQD8 194 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 A0A1W2PQF6 199 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SRRM3A6NNA2 597 aaPredicted RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 A8MXQ7 604 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 ERVH48-1M5A8F1 160 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 CLDN5O00501 218 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 TGFB1I1O43294 461 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 HYAL3O43820 417 aaPredicted RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 TLR5O60602 858 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 ZNF217O75362 1048 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 TOP3BO95985 862 aaKnown RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 CFIP05156 583 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SYPP08247 313 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 PDGFRBP09619 1106 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 DLATP10515 647 aaKnown RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 GABRG2P18507 467 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 TNNI1P19237 187 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 BRD2P25440 801 aaKnown RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 NTSR1P30989 418 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 MAPK8P45983 427 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SLC6A11P48066 632 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 AP3M2P53677 418 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SH3BP2P78314 561 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SIM1P81133 766 aaPredicted RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 AMPD3Q01432 767 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 RPL6Q02878 288 aaKnown RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 GOLGA8FQ08AF8 430 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 GOLGA8DPQ0D2H9 430 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SLC14A1Q13336 389 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 ZNF423Q2M1K9 1284 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 UAP1L1Q3KQV9 507 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 WDR72Q3MJ13 1102 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 C10orf76Q5T2E6 689 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 HECTD3Q5T447 861 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 ALG1LQ6GMV1 187 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 KLHDC10Q6PID8 442 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 ARMCX6Q7L4S7 300 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 RAB44Q7Z6P3 723 aaPredicted RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 TTC30AQ86WT1 665 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 BBS7Q8IWZ6 715 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 HDDC3Q8N4P3 179 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 EHBP1Q8NDI1 1231 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 OR6B3Q8NGW1 331 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 TMEM174Q8WUU8 243 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 KCTD12Q96CX2 325 aaKnown RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 TNIP3Q96KP6 325 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 USP28Q96RU2 1077 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 GABRG3Q99928 467 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 B3GNT5Q9BYG0 378 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SMYD3Q9H7B4 428 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 CCSER2Q9H7U1 834 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 CSNK1G1Q9HCP0 422 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 PNPLA8Q9NP80 782 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SPHK2Q9NRA0 654 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 KRT82Q9NSB4 513 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 DEC1Q9P2X7 70 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SUSD2Q9UGT4 822 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 RALYQ9UKM9 306 aaKnown RBP5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SLC6A14Q9UN76 642 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 SH3BP1Q9Y3L3 701 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 NFE2L3Q9Y4A8 694 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 PTPRQQ9UMZ3 2332 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 CFAP46Q8IYW2 2715 aa5.81□□□□□ -1.48
PDE4D-229ENST00000638939 KNTC1P50748 2209 aa5.8□□□□□ -1.48
PDE4D-229ENST00000638939 DOCK9Q9BZ29 2069 aa5.8□□□□□ -1.48
PDE4D-229ENST00000638939 TBC1D3BA6NDS4 549 aa5.8□□□□□ -1.48
PDE4D-229ENST00000638939 GFRA2O00451 464 aa5.8□□□□□ -1.48
PDE4D-229ENST00000638939 NPC1O15118 1278 aa5.8□□□□□ -1.48
PDE4D-229ENST00000638939 GREM1O60565 184 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms