RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 ATPIF1Q9UII2 106 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 STRIP2Q9ULQ0 834 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 RAB26Q9ULW5 256 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 APOBEC2Q9Y235 224 aaKnown RBP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 SQORQ9Y6N5 450 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 ARPC4-TTLL3A0A0A6YYG9 625 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 ERVV-1B6SEH8 477 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 NKRFO15226 690 aaKnown RBP eCLIP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 GGPS1O95749 300 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 SMIM18P0DKX4 95 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 SLC5A1P13866 664 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 EIF2AK2P19525 551 aaKnown RBP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 COPZ1P61923 177 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 VPS72Q15906 364 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 HERC4Q5GLZ8 1057 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 CENPPQ6IPU0 288 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 NEK5Q6P3R8 708 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 CYP2U1Q7Z449 544 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 ALDH16A1Q8IZ83 802 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 PQLC1Q8N2U9 271 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 MARVELD2Q8N4S9 558 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 TCP10LQ8TDR4 215 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 TRPC4APQ8TEL6 797 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 C12orf43Q96C57 262 aaKnown RBP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 CRAMP1Q96RY5 1269 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 C1orf50Q9BV19 199 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 TRPV6Q9H1D0 765 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 MOV10Q9HCE1 1003 aaKnown RBP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 PI4KBQ9UBF8 816 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 KLHL3Q9UH77 587 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 ILVBLA1L0T0 632 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 PRLP01236 227 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 CYP2D6P10635 497 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 UCHL3P15374 230 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 FOSL1P15407 271 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 SLC9A1P19634 815 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 MAN1A1P33908 653 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 PFKPQ01813 784 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 ATG16L1Q676U5 607 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 TTC27Q6P3X3 843 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 FBXL19Q6PCT2 694 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 SETD3Q86TU7 594 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 PALM2Q8IXS6 379 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 BLIDQ8IZY5 108 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 CLIP4Q8N3C7 705 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 HDAC2Q92769 488 aaKnown RBP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 NRBF2Q96F24 287 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 PRR11Q96HE9 360 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 DEPDC7Q96QD5 511 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 CTRCQ99895 268 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 NUDT12Q9BQG2 462 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 GCOM2Q9BZD3 368 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 UCKL1Q9NWZ5 548 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-213ENST00000638883 ZNHIT2Q9UHR6 403 aa7.35□□□□□ -1.23
NECAP1-213ENST00000638883 A0A087WXM4 84 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 A0A1W2PPW3 197 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 ANKRD63C9JTQ0 380 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 MAGEB2O15479 319 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 KLRC4O43908 158 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 CCNT1O60563 726 aaKnown RBP7.34□□□□□ -1.23
NECAP1-213ENST00000638883 SEMA3DO95025 777 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 IFNB1P01574 187 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 ALOX5P09917 674 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 BGNP21810 368 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 GRK2P25098 689 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 AQP5P55064 265 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 GNG2P59768 71 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 PDIA2Q13087 525 aaKnown RBP7.34□□□□□ -1.23
NECAP1-213ENST00000638883 STK11Q15831 433 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 ERFEQ4G0M1 354 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 FAM47AQ5JRC9 791 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 LDLRAP1Q5SW96 308 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 KRT79Q5XKE5 535 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 ZNF804AQ7Z570 1209 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 NLRX1Q86UT6 975 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 LAPTM4BQ86VI4 370 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 RTKN2Q8IZC4 609 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 Q8N9G6 341 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-213ENST00000638883 ACTRT2Q8TDY3 377 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 MAN1C1Q9NR34 630 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 SLC38A7Q9NVC3 462 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 KBTBD4Q9NVX7 518 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 PCYOX1Q9UHG3 505 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 NIP7Q9Y221 180 aaKnown RBP eCLIP7.34□□□□□ -1.23
NECAP1-213ENST00000638883 GPSM3Q9Y4H4 160 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 UNC80Q8N2C7 3258 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 BTNL10A8MVZ5 291 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 CENPBD1B2RD01 187 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 CLDN3O15551 220 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 DNAJA2O60884 412 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 CLASP2O75122 1294 aaKnown RBP7.34□□□□□ -1.23
NECAP1-213ENST00000638883 DXOO77932 396 aaKnown RBP7.34□□□□□ -1.23
NECAP1-213ENST00000638883 UBL4AP11441 157 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 CTNNA2P26232 953 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 EIF3EP60228 445 aaKnown RBP7.34□□□□□ -1.23
NECAP1-213ENST00000638883 DLG4P78352 724 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 MRPS22P82650 360 aaKnown RBP7.34□□□□□ -1.23
NECAP1-213ENST00000638883 TROAPQ12815 778 aa7.34□□□□□ -1.23
NECAP1-213ENST00000638883 FLOT2Q14254 428 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms