RNA–Protein interactions for RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-229ENST00000638264 ZNF334Q9HCZ1 680 aaPredicted RBP12.14□□□□□ -0.47
TARDBP-229ENST00000638264 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.14□□□□□ -0.47
TARDBP-229ENST00000638264 DDIT4Q9NX09 232 aa12.14□□□□□ -0.47
TARDBP-229ENST00000638264 OSER1Q9NX31 292 aa12.14□□□□□ -0.47
TARDBP-229ENST00000638264 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.14□□□□□ -0.47
TARDBP-229ENST00000638264 MARCH2Q9P0N8 246 aa12.14□□□□□ -0.47
TARDBP-229ENST00000638264 DNMT3BQ9UBC3 853 aaKnown RBP12.14□□□□□ -0.47
TARDBP-229ENST00000638264 SLC12A6Q9UHW9 1150 aa12.14□□□□□ -0.47
TARDBP-229ENST00000638264 USP18Q9UMW8 372 aa12.14□□□□□ -0.47
TARDBP-229ENST00000638264 TRAV19A0A0A6YYK7 116 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 SOX1O00570 391 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-229ENST00000638264 CES2O00748 559 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 MDM4O15151 490 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 GLP2RO95838 553 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 MYL4P12829 197 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 TCP1P17987 556 aaKnown RBP12.13□□□□□ -0.47
TARDBP-229ENST00000638264 MIPP30301 263 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 CETN2P41208 172 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 HDAC4P56524 1084 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 RWDD2BP57060 319 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 ATP11AP98196 1134 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 SCAPQ12770 1279 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 ADGRE1Q14246 886 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 C15orf59Q2T9L4 293 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-229ENST00000638264 PRSS36Q5K4E3 855 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 ATAT1Q5SQI0 421 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 PAPD7Q5XG87 772 aaKnown RBP12.13□□□□□ -0.47
TARDBP-229ENST00000638264 NUGGCQ68CJ6 796 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 GAREM2Q75VX8 874 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 TAC4Q86UU9 113 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
TARDBP-229ENST00000638264 MAP7D3Q8IWC1 876 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 UNC45BQ8IWX7 931 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 AZIN2Q96A70 460 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 PLD4Q96BZ4 506 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 RIPOR3Q96MK2 946 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 ADAM7Q9H2U9 754 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 TASP1Q9H6P5 420 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 WDCPQ9H6R7 721 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 DNAI1Q9UI46 699 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 MYO7AQ13402 2215 aa12.13□□□□□ -0.47
TARDBP-229ENST00000638264 ZNF638Q14966 1978 aaKnown RBP12.12□□□□□ -0.47
TARDBP-229ENST00000638264 ZNF487B1APH4 448 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 COCHO43405 550 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 TADA3O75528 432 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 LATS1O95835 1130 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 FTCDO95954 541 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 HDCP19113 662 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 IGFBP4P22692 258 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 HTR7P34969 479 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.477e-26■■■□□ 18.2
TARDBP-229ENST00000638264 MTHFRP42898 656 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 SSR1P43307 286 aaKnown RBP12.12□□□□□ -0.47
TARDBP-229ENST00000638264 TBX4P57082 545 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 COPS2P61201 443 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 SLC7A9P82251 487 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 SLC25A11Q02978 314 aaKnown RBP12.12□□□□□ -0.47
TARDBP-229ENST00000638264 EFEMP1Q12805 493 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 NME3Q13232 169 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 PDK2Q15119 407 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 CDO1Q16878 200 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 ODF2Q5BJF6 829 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 ERMARDQ5T6L9 678 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 SYCE2Q6PIF2 218 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 SYT10Q6XYQ8 523 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 GRASPQ7Z6J2 395 aaPredicted RBP12.12□□□□□ -0.47
TARDBP-229ENST00000638264 KATNAL2Q8IYT4 538 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 RCOR2Q8IZ40 523 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 HS6ST3Q8IZP7 471 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 ARFGAP1Q8N6T3 406 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 ATP6V0D2Q8N8Y2 350 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 EXD1Q8NHP7 514 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 RNF34Q969K3 372 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 SLC39A13Q96H72 371 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 RBM41Q96IZ5 413 aaKnown RBP12.12□□□□□ -0.47
TARDBP-229ENST00000638264 PBKQ96KB5 322 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 NECTIN4Q96NY8 510 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 WDR24Q96S15 920 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 HAPLN3Q96S86 360 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 DCLK3Q9C098 648 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 CARD9Q9H257 536 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 WDR6Q9NNW5 1121 aaKnown RBP12.12□□□□□ -0.47
TARDBP-229ENST00000638264 ARHGEF38Q9NXL2 777 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 RNF14Q9UBS8 474 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 MRPS23Q9Y3D9 190 aaKnown RBP12.12□□□□□ -0.47
TARDBP-229ENST00000638264 ZFP37Q9Y6Q3 630 aaPredicted RBP12.12□□□□□ -0.47
TARDBP-229ENST00000638264 MYO9BQ13459 2157 aa12.12□□□□□ -0.47
TARDBP-229ENST00000638264 ATG2AQ2TAZ0 1938 aa12.11□□□□□ -0.47
TARDBP-229ENST00000638264 A0A1W2PRU2 124 aa12.11□□□□□ -0.47
TARDBP-229ENST00000638264 ZRANB2O95218 330 aaKnown RBP eCLIP12.11□□□□□ -0.475e-13■□□□□ 10.2
TARDBP-229ENST00000638264 IGLV3-27P01718 113 aa12.11□□□□□ -0.47
TARDBP-229ENST00000638264 APOEP02649 317 aa12.11□□□□□ -0.47
TARDBP-229ENST00000638264 TCF3P15923 654 aa12.11□□□□□ -0.47
TARDBP-229ENST00000638264 ADRA1BP35368 520 aa12.11□□□□□ -0.47
TARDBP-229ENST00000638264 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
TARDBP-229ENST00000638264 PGFP49763 221 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms