RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 FAM71DQ8N9W8 422 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 NTAN1Q96AB6 310 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 FUBP3Q96I24 572 aaKnown RBP eCLIP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 TRIM62Q9BVG3 475 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 COLEC11Q9BWP8 271 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 MAGEB5Q9BZ81 275 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 PPP1R12CQ9BZL4 782 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 PRDM16Q9HAZ2 1276 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 WDR6Q9NNW5 1121 aaKnown RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 CWC15Q9P013 229 aaKnown RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 COX16Q9P0S2 106 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 CFAP69A5D8W1 941 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 H7C0C1 242 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 TNFRSF10BO14763 440 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 GOT1P17174 413 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 RPL22P35268 128 aaKnown RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 ATP5OP48047 213 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 SLC11A1P49279 550 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 CTCFP49711 727 aaPredicted RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 SLC5A3P53794 718 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 SCAPQ12770 1279 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 MRPL58Q14197 206 aaKnown RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 NFE2Q16621 373 aaPredicted RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 EFHC2Q5JST6 749 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 BSPRYQ5W0U4 402 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 NCBP2-AS2Q69YL0 99 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 HOOK3Q86VS8 718 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 RTP4Q96DX8 246 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 PWWP2AQ96N64 755 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 TMEM175Q9BSA9 504 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 GPR62Q9BZJ7 368 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 USP29Q9HBJ7 922 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 DNAJC17Q9NVM6 304 aaKnown RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 ABI2Q9NYB9 513 aaPredicted RBP12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 PSD3Q9NYI0 1048 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 HCSTQ9UBK5 93 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 HEY1Q9Y5J3 304 aa12.72□□□□□ -0.37
CACNA1D-228ENST00000638120 SF3B1O75533 1304 aaKnown RBP eCLIP12.71□□□□□ -0.37
CACNA1D-228ENST00000638120 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 BCLAF3A2AJT9 711 aaKnown RBP12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 TBKBP1A7MCY6 615 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 H3BRJ5 948 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 TTC4O95801 387 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 F9P00740 461 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 ALDH2P05091 517 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 FGFR3P22607 806 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 CYP2C18P33260 490 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 GRIK1P39086 918 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 NR2C2P49116 596 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 GBE1Q04446 702 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 KRT71Q3SY84 523 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 CTXN3Q4LDR2 81 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 AGBL2Q5U5Z8 902 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 FAM171A1Q5VUB5 890 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 KCTD16Q68DU8 428 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 ZNF280DQ6N043 979 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 PPIL6Q8IXY8 311 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 LRRC43Q8N309 656 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 SH2D3CQ8N5H7 860 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 SCAMP5Q8TAC9 235 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 ADAM32Q8TC27 787 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 RNF139Q8WU17 664 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 CPT1BQ92523 772 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 EDEM1Q92611 657 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 TMEM109Q9BVC6 243 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 ARHGEF4Q9NR80 690 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 TMPRSS4Q9NRS4 437 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 DDIT4Q9NX09 232 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 TBX21Q9UL17 535 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 MYO16Q9Y6X6 1858 aa12.71□□□□□ -0.38
CACNA1D-228ENST00000638120 OR6C75A6NL08 312 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 GALTP07902 379 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 ADRA1BP35368 520 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 ELAVL2Q12926 359 aaKnown RBP12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 XRCC4Q13426 336 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 FUT10Q6P4F1 479 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 VSTM1Q6UX27 236 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 DEFB128Q7Z7B8 93 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 CROCCP2Q86T23 111 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 TAC4Q86UU9 113 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 CDKL3Q8IVW4 592 aaPredicted RBP12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 ZNF333Q96JL9 665 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 RBM15Q96T37 977 aaKnown RBP eCLIP12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 PHACTR1Q9C0D0 580 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 LRRC4CQ9HCJ2 640 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 NINJ2Q9NZG7 142 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 FBXW11Q9UKB1 542 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 PLXNA3P51805 1871 aa12.7□□□□□ -0.38
CACNA1D-228ENST00000638120 SMAPO00193 183 aa12.69□□□□□ -0.38
CACNA1D-228ENST00000638120 ACSL3O95573 720 aa12.69□□□□□ -0.38
CACNA1D-228ENST00000638120 AMPD1P23109 780 aa12.69□□□□□ -0.38
CACNA1D-228ENST00000638120 RBL1P28749 1068 aa12.69□□□□□ -0.38
CACNA1D-228ENST00000638120 MAGEA11P43364 429 aa12.69□□□□□ -0.38
CACNA1D-228ENST00000638120 CXCR3P49682 368 aa12.69□□□□□ -0.38
CACNA1D-228ENST00000638120 SLC10A2Q12908 348 aaPredicted RBP12.69□□□□□ -0.38
CACNA1D-228ENST00000638120 SEMA3BQ13214 749 aa12.69□□□□□ -0.38
CACNA1D-228ENST00000638120 B4GALNT4Q76KP1 1039 aa12.69□□□□□ -0.38
CACNA1D-228ENST00000638120 CEP57Q86XR8 500 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms