RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 PBX3P40426 434 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 MCCD1P59942 119 aaPredicted RBP10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 MRPS5P82675 430 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 ACAP1Q15027 740 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 DEFB115Q30KQ5 88 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 RNASEH2BQ5TBB1 312 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 CLEC20AQ6ZU45 233 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 FAM35AQ86V20 835 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 THEM5Q8N1Q8 247 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 PRCCQ92733 491 aaPredicted RBP10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 SEC16BQ96JE7 1060 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 CAPNS2Q96L46 248 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 TTC25Q96NG3 672 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 TGS1Q96RS0 853 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 ZC3H7BQ9UGR2 993 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 SLC12A6Q9UHW9 1150 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 ARID2Q68CP9 1835 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 WDR90Q96KV7 1748 aa10.04□□□□□ -0.8
CACNA1A-248ENST00000637774 KPNA6O60684 536 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 TADA2AO75478 443 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 GABBR2O75899 941 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 MT-ND3P03897 115 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 HMBSP08397 361 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 CYBAP13498 195 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 LHX1P48742 406 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 RHBDF2Q6PJF5 856 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 CES3Q6UWW8 571 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 SPATA2LQ8IUW3 424 aaPredicted RBP10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 PCSK9Q8NBP7 692 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 CCDC197Q8NCU1 140 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 SCAMP5Q8TAC9 235 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 SLCO2A1Q92959 643 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 MYLPFQ96A32 169 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 B3GALT6Q96L58 329 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 HSFY1Q96LI6 401 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 KCTD15Q96SI1 283 aaPredicted RBP10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 TMEM209Q96SK2 561 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 CRTAC1Q9NQ79 661 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 PAK5Q9P286 719 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 TXNDC16Q9P2K2 825 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 SHOC2Q9UQ13 582 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 TRIP11Q15643 1979 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 A0A1W2PPM1 405 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 MGEA5O60502 916 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 SHOX2O60902 331 aaPredicted RBP10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 ODC1P11926 461 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 KCNE1P15382 129 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 MATKP42679 507 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 GABRB2P47870 512 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 GJA9P57773 515 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 DNAJC3Q13217 504 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 NOMO1Q15155 1222 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 PCBP1Q15365 356 aaKnown RBP eCLIP10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 SLC26A9Q7LBE3 791 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 CRYBG2Q8N1P7 616 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 TTC17Q96AE7 1141 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 PGBD4Q96DM1 585 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 CSPG4P5Q96PW8 444 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 WDCPQ9H6R7 721 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 C3orf70A6NLC5 250 aaPredicted RBP10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 H3BRJ5 948 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 DFFAO00273 331 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 XPO1O14980 1071 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 TP73O15350 636 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 TRAPPC3O43617 180 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 ITGB1P05556 798 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 HOXD10P28358 340 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 GRIA1P42261 906 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 ADAM17P78536 824 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 ARL13BQ3SXY8 428 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 SPOUT1Q5T280 376 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 BTBD8Q5XKL5 378 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 CDKL3Q8IVW4 592 aaPredicted RBP10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 PDCD7Q8N8D1 485 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 RNF139Q8WU17 664 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 TLCD1Q96CP7 247 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 PAFAH2Q99487 392 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 POPDC2Q9HBU9 364 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 LRFN2Q9ULH4 789 aa10.03□□□□□ -0.8
CACNA1A-248ENST00000637774 ATP9BO43861 1147 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 CACNA2D1P54289 1103 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 IL9RQ01113 521 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 NOGQ13253 232 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 BMPR2Q13873 1038 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 ARHGAP17Q68EM7 881 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 GPRIN1Q7Z2K8 1008 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 TP53INP2Q8IXH6 220 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 TOP6BLQ8N6T0 577 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 TFB1MQ8WVM0 346 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 IL1RAPL1Q9NZN1 696 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 DDX20Q9UHI6 824 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 C2CD2LO14523 706 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 PQBP1O60828 265 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 LTFP02788 710 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 CPB1P15086 417 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 NOS2P35228 1153 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 YWHAHQ04917 246 aaPredicted RBP10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 KBTBD12Q3ZCT8 623 aa10.02□□□□□ -0.81
CACNA1A-248ENST00000637774 ALKAL1Q6UXT8 129 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms