RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 PLK2Q9NYY3 685 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 MARCH2Q9P0N8 246 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 MBD1Q9UIS9 605 aaPredicted RBP21.07■□□□□ 0.96
CLN6-222ENST00000637667 MAN1B1Q9UKM7 699 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 TSPAN16Q9UKR8 245 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 STRIP2Q9ULQ0 834 aa21.07■□□□□ 0.96
CLN6-222ENST00000637667 CACNA1BQ00975 2339 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 TULP2O00295 520 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 XPO1O14980 1071 aaKnown RBP21.06■□□□□ 0.96
CLN6-222ENST00000637667 ZBED1O96006 694 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 HMBSP08397 361 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 CD44P16070 742 aaKnown RBP21.06■□□□□ 0.96
CLN6-222ENST00000637667 TBXAS1P24557 533 aaPredicted RBP21.06■□□□□ 0.96
CLN6-222ENST00000637667 CORO1AP31146 461 aaKnown RBP21.06■□□□□ 0.96
CLN6-222ENST00000637667 PDE4CQ08493 712 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 LRMPQ12912 555 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 PM20D1Q6GTS8 502 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 ISM2Q6H9L7 571 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 CHPFQ8IZ52 775 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 UBR7Q8N806 425 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 FRMD1Q8N878 549 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 PIGKQ92643 395 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 P2RY11Q96G91 374 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 HESX1Q9UBX0 185 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 THADAQ6YHU6 1953 aa21.06■□□□□ 0.96
CLN6-222ENST00000637667 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 A0A1W2PQF6 199 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 SLC12A8A0AV02 714 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 LNP1A1A4G5 178 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 KHNYNO15037 678 aaKnown RBP21.05■□□□□ 0.96
CLN6-222ENST00000637667 PENKP01210 267 aaPredicted RBP21.05■□□□□ 0.96
CLN6-222ENST00000637667 GABRG2P18507 467 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 CHKAP35790 457 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 PPP1R2P41236 205 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 FMO5P49326 533 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 BST2Q10589 180 aaKnown RBP21.05■□□□□ 0.96
CLN6-222ENST00000637667 SDE2Q6IQ49 451 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 TMEFF1Q8IYR6 380 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 NDRG1Q92597 394 aaKnown RBP21.05■□□□□ 0.96
CLN6-222ENST00000637667 LSM14BQ9BX40 385 aaKnown RBP21.05■□□□□ 0.96
CLN6-222ENST00000637667 LRRC4Q9HBW1 653 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 CALCOCO1Q9P1Z2 691 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 FBXO10Q9UK96 956 aa21.05■□□□□ 0.96
CLN6-222ENST00000637667 O00370 1275 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 PMM2O15305 246 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 ZBTB24O43167 697 aaPredicted RBP21.04■□□□□ 0.96
CLN6-222ENST00000637667 VDRP11473 427 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 PTGER3P43115 390 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 CCDC40Q4G0X9 1142 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 SPDYCQ5MJ68 293 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 KLHL10Q6JEL2 608 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 ARMCX6Q7L4S7 300 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 BHLHA9Q7RTU4 235 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 IPO4Q8TEX9 1081 aaKnown RBP21.04■□□□□ 0.96
CLN6-222ENST00000637667 NT5C1BQ96P26 610 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 IPO9Q96P70 1041 aaKnown RBP21.04■□□□□ 0.96
CLN6-222ENST00000637667 GABRG3Q99928 467 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 CD248Q9HCU0 757 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 AGO1Q9UL18 857 aaKnown RBP21.04■□□□□ 0.96
CLN6-222ENST00000637667 KIAA1257Q9ULG3 409 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 SLC27A6Q9Y2P4 619 aa21.04■□□□□ 0.96
CLN6-222ENST00000637667 C4orf47A7E2U8 309 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 PATE3B3GLJ2 98 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 ADIGQ0VDE8 80 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 FYB2Q5VWT5 728 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 KIAA1211LQ6NV74 962 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 TTI2Q6NXR4 508 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 DENND1CQ8IV53 801 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 UBA3Q8TBC4 463 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 CNTNAP3BQ96NU0 1288 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 CNTNAP3Q9BZ76 1288 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 CACNA2D2Q9NY47 1150 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 NUP205Q92621 2012 aa21.03■□□□□ 0.96
CLN6-222ENST00000637667 CEP295Q9C0D2 2601 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 PPP1R3GB7ZBB8 358 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 GFRA2O00451 464 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 PAEPP09466 180 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 SETSIPP0DME0 302 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 BMP6P22004 513 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 MFAP3P55082 362 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 IRX4P78413 519 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 PKDCCQ504Y2 493 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 LYSMD4Q5XG99 296 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 FOXR2Q6PJQ5 311 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 TMEM270Q6UE05 265 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 SIX6OS1Q8N1H7 587 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 CPXM2Q8N436 756 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 NELFBQ8WX92 580 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 TFAP2BQ92481 460 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 PLD4Q96BZ4 506 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 ERLEC1Q96DZ1 483 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 OLA1Q9NTK5 396 aaKnown RBP21.02■□□□□ 0.96
CLN6-222ENST00000637667 EVLQ9UI08 416 aaPredicted RBP21.02■□□□□ 0.96
CLN6-222ENST00000637667 PCDHB4Q9Y5E5 795 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 LAMA1P25391 3075 aa21.02■□□□□ 0.96
CLN6-222ENST00000637667 CYBBP04839 570 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 NDUFV2P19404 249 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 CETN1Q12798 172 aa21.01■□□□□ 0.95
CLN6-222ENST00000637667 TRIP4Q15650 581 aaPredicted RBP21.01■□□□□ 0.95
CLN6-222ENST00000637667 N4BP2L1Q5TBK1 243 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms