RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 OLA1Q9NTK5 396 aaKnown RBP15.97■□□□□ 0.15
CLN6-219ENST00000637329 PIGVQ9NUD9 493 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 DDIT4Q9NX09 232 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 RASAL2Q9UJF2 1139 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 FZD10Q9ULW2 581 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 IRAK3Q9Y616 596 aa15.97■□□□□ 0.15
CLN6-219ENST00000637329 TMEM265A0A087WTH1 108 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 TCRBV7S2A1N4TA0A589 114 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 CCDC151A5D8V7 595 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 SLC38A8A6NNN8 435 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 IRAK2O43187 625 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 RAD51CO43502 376 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 H2AFXP16104 143 aaPredicted RBP15.96■□□□□ 0.15
CLN6-219ENST00000637329 RPL17P18621 184 aaKnown RBP15.96■□□□□ 0.15
CLN6-219ENST00000637329 DR1Q01658 176 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 IFRD2Q12894 506 aaPredicted RBP15.96■□□□□ 0.15
CLN6-219ENST00000637329 PLD1Q13393 1074 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 BRD3Q15059 726 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 CCNG2Q16589 344 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 ARL13BQ3SXY8 428 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 RAB6CQ53S08 254 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 EFHC2Q5JST6 749 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 BRMS1LQ5PSV4 323 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 SYDE1Q6ZW31 735 aaPredicted RBP15.96■□□□□ 0.15
CLN6-219ENST00000637329 ADAT2Q7Z6V5 191 aaKnown RBP15.96■□□□□ 0.15
CLN6-219ENST00000637329 SCD5Q86SK9 330 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 TAC4Q86UU9 113 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 FAM131BQ86XD5 332 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 TCEAL8Q8IYN2 117 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 ZDHHC14Q8IZN3 488 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 KLHL23Q8NBE8 558 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 TSC1Q92574 1164 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 MAGOHBQ96A72 148 aaKnown RBP15.96■□□□□ 0.15
CLN6-219ENST00000637329 TRMT2BQ96GJ1 504 aaKnown RBP15.96■□□□□ 0.15
CLN6-219ENST00000637329 SERPINB11Q96P15 392 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 HERPUD2Q9BSE4 406 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 CALN1Q9BXU9 219 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 DCLK3Q9C098 648 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 RAB6CQ9H0N0 254 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 WDR6Q9NNW5 1121 aaKnown RBP15.96■□□□□ 0.15
CLN6-219ENST00000637329 TLR8Q9NR97 1041 aaKnown RBP15.96■□□□□ 0.15
CLN6-219ENST00000637329 CALCOCO1Q9P1Z2 691 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 FEZ2Q9UHY8 353 aaPredicted RBP15.96■□□□□ 0.15
CLN6-219ENST00000637329 SLC27A5Q9Y2P5 690 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 NR2E1Q9Y466 385 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 YIPF1Q9Y548 306 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 PLXNA4Q9HCM2 1894 aa15.96■□□□□ 0.15
CLN6-219ENST00000637329 A0A1W2PQH9 124 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 LINC01553A4QN01 128 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 APOC4-APOC2K7ER74 178 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 HEXIM1O94992 359 aaKnown RBP15.95■□□□□ 0.14
CLN6-219ENST00000637329 C1RP00736 705 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 APOC2P02655 101 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 RB1P06400 928 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 ZDHHC11BP0C7U3 371 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 CSH1P0DML2 217 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 CSH2P0DML3 217 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 COILP38432 576 aaPredicted RBP15.95■□□□□ 0.14
CLN6-219ENST00000637329 CXCR3P49682 368 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 USP46P62068 366 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 PITX1P78337 314 aaPredicted RBP15.95■□□□□ 0.14
CLN6-219ENST00000637329 LMNB2Q03252 620 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 NME3Q13232 169 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 EIF4EBP2Q13542 120 aaPredicted RBP15.95■□□□□ 0.14
CLN6-219ENST00000637329 VEPH1Q14D04 833 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 CCDC137Q6PK04 289 aaKnown RBP15.95■□□□□ 0.14
CLN6-219ENST00000637329 ANKS1BQ7Z6G8 1248 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 ZNF276Q8N554 614 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 CCDC185Q8N715 623 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 EIF1ADQ8N9N8 165 aaKnown RBP15.95■□□□□ 0.14
CLN6-219ENST00000637329 RNF139Q8WU17 664 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 EDEM1Q92611 657 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 PNKPQ96T60 521 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 HEMGNQ9BXL5 484 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 PARD6BQ9BYG5 372 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 RAB17Q9H0T7 212 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 GMIPQ9P107 970 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 FBXW11Q9UKB1 542 aa15.95■□□□□ 0.14
CLN6-219ENST00000637329 GREB1Q4ZG55 1949 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 LCHNA4D1U4 455 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 BHMG1C9JSJ3 638 aaPredicted RBP15.94■□□□□ 0.14
CLN6-219ENST00000637329 TEX28O15482 410 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 ERLIN1O75477 346 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 SOAT2O75908 522 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 ADH1AP07327 375 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 CD48P09326 243 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 KRT10P13645 584 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 ZFXP17010 805 aaPredicted RBP15.94■□□□□ 0.14
CLN6-219ENST00000637329 TGM2P21980 687 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 DNAJB2P25686 324 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 L1CAMP32004 1257 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 ELF1P32519 619 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 ARL4AP40617 200 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 ALDH1A3P47895 512 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 ATXN1P54253 815 aaKnown RBP15.94■□□□□ 0.14
CLN6-219ENST00000637329 MTA1Q13330 715 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 MAP9Q49MG5 647 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 ZC3H12AQ5D1E8 599 aaKnown RBP15.94■□□□□ 0.14
CLN6-219ENST00000637329 SDHAF4Q5VUM1 108 aa15.94■□□□□ 0.14
CLN6-219ENST00000637329 SNX30Q5VWJ9 437 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms