RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 RAD54LQ92698 747 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 BHMTQ93088 406 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 P2RY11Q96G91 374 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 ANKRD36BP1Q96IX9 119 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 CNDP2Q96KP4 475 aaKnown RBP19.19■□□□□ 0.66
CLN6-212ENST00000636020 KCNK16Q96T55 309 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 SNX25Q9H3E2 840 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 DPEP3Q9H4B8 488 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 PLK2Q9NYY3 685 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 PTPRJQ12913 1337 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 MYH10P35580 1976 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 CKAP5Q14008 2032 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 A0A1B0GTQ1 180 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 FAM92AA1XBS5 289 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 TLR5O60602 858 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 TACC1O75410 805 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 GARTP22102 1010 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 ACADVLP49748 655 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 PGFP49763 221 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 LY6DQ14210 128 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 GEN1Q17RS7 908 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 SFR1Q86XK3 245 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 CACUL1Q86Y37 369 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 GATAD2AQ86YP4 633 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 CALML4Q96GE6 196 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 ARID3AQ99856 593 aa19.18■□□□□ 0.66
CLN6-212ENST00000636020 TSPAN3O60637 253 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 TBX18O95935 607 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 FAM163BP0C2L3 166 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 CD27P26842 260 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 SLC5A3P53794 718 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 CDH8P55286 799 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 HMGN5P82970 282 aaKnown RBP19.17■□□□□ 0.66
CLN6-212ENST00000636020 ZNF234Q14588 700 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 ARL6IP4Q66PJ3 421 aaKnown RBP19.17■□□□□ 0.66
CLN6-212ENST00000636020 CACTIN-AS1Q8N1I8 211 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 FAM184AQ8NB25 1140 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 OR6B3Q8NGW1 331 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 TSC1Q92574 1164 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 BIRC7Q96CA5 298 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 COMMD8Q9NX08 183 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 LSM7Q9UK45 103 aaKnown RBP19.17■□□□□ 0.66
CLN6-212ENST00000636020 EXOC7Q9UPT5 735 aa19.17■□□□□ 0.66
CLN6-212ENST00000636020 PRKCHP24723 683 aa19.16■□□□□ 0.66
CLN6-212ENST00000636020 MFAP3P55082 362 aa19.16■□□□□ 0.66
CLN6-212ENST00000636020 L1TD1Q5T7N2 865 aaKnown RBP19.16■□□□□ 0.66
CLN6-212ENST00000636020 KRI1Q8N9T8 703 aaKnown RBP19.16■□□□□ 0.66
CLN6-212ENST00000636020 B3GALNT2Q8NCR0 500 aa19.16■□□□□ 0.66
CLN6-212ENST00000636020 UCMAQ8WVF2 138 aa19.16■□□□□ 0.66
CLN6-212ENST00000636020 TTC9Q92623 222 aa19.16■□□□□ 0.66
CLN6-212ENST00000636020 AK8Q96MA6 479 aa19.16■□□□□ 0.66
CLN6-212ENST00000636020 ACCSQ96QU6 501 aa19.16■□□□□ 0.66
CLN6-212ENST00000636020 LGMNQ99538 433 aa19.16■□□□□ 0.66
CLN6-212ENST00000636020 ORAI3Q9BRQ5 295 aa19.16■□□□□ 0.66
CLN6-212ENST00000636020 CBWD1Q9BRT8 395 aa19.16■□□□□ 0.66
CLN6-212ENST00000636020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.15■□□□□ 0.66
CLN6-212ENST00000636020 SLC28A2O43868 658 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 TNNC2P02585 160 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 C7P10643 843 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 DDIT3P35638 169 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 UBA7P41226 1012 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 CSRP3P50461 194 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 TMPRSS3P57727 454 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 DUOXA2Q1HG44 320 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 PRAMEF14Q5SWL7 426 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 ARHGAP40Q5TG30 622 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 Q6ZNB5 142 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 ADAT2Q7Z6V5 191 aaKnown RBP19.15■□□□□ 0.66
CLN6-212ENST00000636020 RBBP8NLQ8NC74 664 aaPredicted RBP19.15■□□□□ 0.66
CLN6-212ENST00000636020 ELF4Q99607 663 aaPredicted RBP19.15■□□□□ 0.66
CLN6-212ENST00000636020 CPNE5Q9HCH3 593 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 ELOVL2Q9NXB9 296 aa19.15■□□□□ 0.66
CLN6-212ENST00000636020 VILLO15195 856 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 SEMA4FO95754 770 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 PENKP01210 267 aaPredicted RBP19.14■□□□□ 0.65
CLN6-212ENST00000636020 ITGAVP06756 1048 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 EPHX1P07099 455 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 UCNP55089 124 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 GOLGA8FQ08AF8 430 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 GOLGA8DPQ0D2H9 430 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 SHBQ15464 509 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 RILPL1Q5EBL4 403 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 PAQR9Q6ZVX9 377 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 ZNF248Q8NDW4 579 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 OR2T3Q8NH03 318 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 SAP25Q8TEE9 199 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 NOC3LQ8WTT2 800 aaKnown RBP19.14■□□□□ 0.65
CLN6-212ENST00000636020 LARP4BQ92615 738 aaKnown RBP19.14■□□□□ 0.65
CLN6-212ENST00000636020 LHX5Q9H2C1 402 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 PCIF1Q9H4Z3 704 aa19.14■□□□□ 0.65
CLN6-212ENST00000636020 MRPL44Q9H9J2 332 aaKnown RBP19.14■□□□□ 0.65
CLN6-212ENST00000636020 BOD1L1Q8NFC6 3051 aa19.13■□□□□ 0.65
CLN6-212ENST00000636020 A8MXQ7 604 aa19.13■□□□□ 0.65
CLN6-212ENST00000636020 FSBPO95073 299 aa19.13■□□□□ 0.65
CLN6-212ENST00000636020 GLDCP23378 1020 aa19.13■□□□□ 0.65
CLN6-212ENST00000636020 ATP5C1P36542 298 aaKnown RBP19.13■□□□□ 0.65
CLN6-212ENST00000636020 C21orf59P57076 290 aa19.13■□□□□ 0.65
CLN6-212ENST00000636020 CAMK2GQ13555 558 aaPredicted RBP19.13■□□□□ 0.65
CLN6-212ENST00000636020 E2F5Q15329 346 aa19.13■□□□□ 0.65
CLN6-212ENST00000636020 BROXQ5VW32 411 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms