RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 SCAMP5Q8TAC9 235 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 ZNF483Q8TF39 744 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 ATRIPQ8WXE1 791 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 HERVK_113Q902F9 699 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 HDAC2Q92769 488 aaKnown RBP5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 TOX2Q96NM4 488 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 EPS8L2Q9H6S3 715 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 ELAC1Q9H777 363 aaKnown RBP5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 CXorf36Q9H7Y0 433 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 GBA2Q9HCG7 927 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 IFT80Q9P2H3 777 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 MRPS17Q9Y2R5 130 aaKnown RBP5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 NOX1Q9Y5S8 564 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 FPGT-TNNI3KV9GXZ4 949 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 VPS8Q8N3P4 1428 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 FMN2Q9NZ56 1722 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 KAT6BQ8WYB5 2073 aa5.7□□□□□ -1.5
TRAPPC9-216ENST00000634178 MAP3K5Q99683 1374 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 NRKQ7Z2Y5 1582 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 NAIPQ13075 1403 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 GAGE12BA1L429 117 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 GAGE12HA6NDE8 117 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 H0Y3Z8 333 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 J3KTA2 159 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 RHOBTB3O94955 611 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 GYS1P13807 737 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 COMTP21964 271 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 RBL1P28749 1068 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 AKT1P31749 480 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 APOBEC3AP31941 199 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 PNLIPRP1P54315 467 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 EIF5P55010 431 aaKnown RBP5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 MPP1Q00013 466 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 MAPK7Q13164 816 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 CUL4BQ13620 913 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 CLCA4Q14CN2 919 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 L1TD1Q5T7N2 865 aaKnown RBP5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 GDF7Q7Z4P5 450 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 TMTC1Q8IUR5 882 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 CPT1CQ8TCG5 803 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 ASB12Q8WXK4 309 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 GOLGA1Q92805 767 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 C3orf49Q96BT1 292 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 BOD1Q96IK1 185 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 LRIG1Q96JA1 1093 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 TWSG1Q9GZX9 223 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 SMOC2Q9H3U7 446 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 UNKLQ9H9P5 680 aaKnown RBP5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 TMLHEQ9NVH6 421 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 PI4KBQ9UBF8 816 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 LPAR3Q9UBY5 353 aa5.69□□□□□ -1.5
TRAPPC9-216ENST00000634178 AATKQ6ZMQ8 1374 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 B9A039 149 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 RPS6KA4O75676 772 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 LARGE1O95461 756 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 PLATP00750 562 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 ARP10275 920 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 UQCRC1P31930 480 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 CNR2P34972 360 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 ADAM17P78536 824 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 TIAL1Q01085 375 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 OCA2Q04671 838 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 SLC12A1Q13621 1099 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 ANKRD1Q15327 319 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 PTCHD3Q3KNS1 767 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 RBM20Q5T481 1227 aaKnown RBP5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 C1QL3Q5VWW1 255 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 RAB11FIP4Q86YS3 637 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 TMEM132CQ8N3T6 1108 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 TSPYL6Q8N831 410 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 USP38Q8NB14 1042 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 PCYOX1LQ8NBM8 494 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 SIMC1Q8NDZ2 872 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 OSCP1Q8WVF1 389 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 FAM136AQ96C01 138 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 COG8Q96MW5 612 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 NEU1Q99519 415 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 SERHL2Q9H4I8 314 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 GALNT9Q9HCQ5 603 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 TRIM36Q9NQ86 728 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 TRPM5Q9NZQ8 1165 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 PPP4R1LQ9P1A2 415 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 VPS51Q9UID3 782 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 KIF1BO60333 1816 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 XDHP47989 1333 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 KNDC1Q76NI1 1749 aa5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 GOLGB1Q14789 3259 aaKnown RBP5.68□□□□□ -1.5
TRAPPC9-216ENST00000634178 COL15A1P39059 1388 aa5.67□□□□□ -1.5
TRAPPC9-216ENST00000634178 ROCK1Q13464 1354 aa5.67□□□□□ -1.5
TRAPPC9-216ENST00000634178 MYOM1P52179 1685 aa5.67□□□□□ -1.5
TRAPPC9-216ENST00000634178 NRXN1Q9ULB1 1477 aa5.67□□□□□ -1.5
TRAPPC9-216ENST00000634178 A6NLC8 198 aa5.67□□□□□ -1.5
TRAPPC9-216ENST00000634178 PLSCR1O15162 318 aa5.67□□□□□ -1.5
TRAPPC9-216ENST00000634178 FOXS1O43638 330 aa5.67□□□□□ -1.5
TRAPPC9-216ENST00000634178 TSPAN3O60637 253 aa5.67□□□□□ -1.5
TRAPPC9-216ENST00000634178 TFRCP02786 760 aaKnown RBP5.67□□□□□ -1.5
TRAPPC9-216ENST00000634178 CFIP05156 583 aa5.67□□□□□ -1.5
TRAPPC9-216ENST00000634178 RXRAP19793 462 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms