RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 HEPHQ9BQS7 1158 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 SARGQ9BW04 601 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TRIM54Q9BYV2 358 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 OSBPL7Q9BZF2 842 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 PPANQ9NQ55 473 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MAN1C1Q9NR34 630 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CHRAC1Q9NRG0 131 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 GIN1Q9NXP7 522 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 STX18Q9P2W9 335 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 KCNN3Q9UGI6 736 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MAD2L2Q9UI95 211 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 LRFN2Q9ULH4 789 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 POLHQ9Y253 713 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 SNX13Q9Y5W8 968 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CASZ1Q86V15 1759 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 RGPD1P0DJD0 1748 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 A0A1W2PPL8 197 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CENPBD1B2RD01 187 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 RRP8O43159 456 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 PPIP5K2O43314 1243 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 SRGAP2O75044 1071 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 SOCS5O75159 536 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CDC123O75794 336 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 AFPP02771 609 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 PROCP04070 461 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 KRT1P04264 644 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 URODP06132 367 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 FHP07954 510 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 SRGAP2CP0DJJ0 459 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ALADP13716 330 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CCNA2P20248 432 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 KCNA3P22001 575 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 RPS6KB1P23443 525 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CASP14P31944 242 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 IREB2P48200 963 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 GSSP48637 474 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 AIF1P55008 147 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MLLT6P55198 1093 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ATP8B2P98198 1209 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CDK18Q07002 472 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CPSF1Q10570 1443 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 FUT2Q10981 343 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 COL9A2Q14055 689 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 R3HDM1Q15032 1099 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ADCK5Q3MIX3 580 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CDONQ4KMG0 1287 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ARHGEF16Q5VV41 709 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 LAYNQ6UX15 382 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TRPM8Q7Z2W7 1104 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TMC3Q7Z5M5 1100 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 PM20D2Q8IYS1 436 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CARFQ8N187 725 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 KRT78Q8N1N4 520 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TSPYL6Q8N831 410 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ARRDC4Q8NCT1 418 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 LURAP1Q96LR2 239 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 QKIQ96PU8 341 aaKnown RBP eCLIP4.01□□□□□ -1.772e-6■■■■□ 24.7
R3HDM1-220ENST00000628915 USB1Q9BQ65 265 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 APOL2Q9BQE5 337 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF717Q9BY31 904 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 FRMD8Q9BZ67 464 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ACPTQ9BZG2 426 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 DENND2DQ9H6A0 471 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MBIPQ9NS73 344 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ABI2Q9NYB9 513 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CABP1Q9NZU7 370 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TUBE1Q9UJT0 475 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TDRKHQ9Y2W6 561 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 STARD13Q9Y3M8 1113 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 NAALAD2Q9Y3Q0 740 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 SHANK3Q9BYB0 1731 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 LOC105371267A0A1B0GV96 52 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 WFS1O76024 890 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ALDH1A2O94788 518 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 FKBP9O95302 570 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ESRRBO95718 433 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 OCM2P0CE71 109 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 OCMP0CE72 109 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CMA1P23946 247 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ACSL1P33121 698 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 RXRGP48443 463 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ARHGDIAP52565 204 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 RAB15P59190 212 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 SKP1P63208 163 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF33BQ06732 778 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ST3GAL1Q11201 340 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MTMR1Q13613 665 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ITIH4Q14624 930 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MCMDC2Q4G0Z9 681 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TMEM63BQ5T3F8 832 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 PAPD7Q5XG87 772 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 RNF19BQ6ZMZ0 732 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 USP51Q70EK9 711 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TPRA1Q86W33 373 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 PLCZ1Q86YW0 608 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 NIPA2Q8N8Q9 360 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 MLKLQ8NB16 471 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 C11orf65Q8NCR3 313 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 EXD1Q8NHP7 514 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 AGAP11Q8TF27 550 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms