RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 SOX1O00570 391 aaPredicted RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ADAM12O43184 909 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ABLIM3O94929 683 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 VNN2O95498 520 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ECEL1O95672 775 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 GAS8O95995 478 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 LINC00271P0C7V0 271 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 CTSAP10619 480 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 KRT10P13645 584 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 HOXB1P14653 301 aaPredicted RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ATF2P15336 505 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 L1CAMP32004 1257 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ELF1P32519 619 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 BMPR1AP36894 532 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ARL4AP40617 200 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ALDH1A3P47895 512 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 GPR15P49685 360 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 VSNL1P62760 191 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 SLC7A5Q01650 507 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 GUCY2DQ02846 1103 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 SCAPQ12770 1279 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 IFRD2Q12894 506 aaPredicted RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 DUSP4Q13115 394 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 NME3Q13232 169 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 DPYSL3Q14195 570 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 VEPH1Q14D04 833 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 RAB6CQ53S08 254 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 EFHC2Q5JST6 749 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 BRMS1LQ5PSV4 323 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 OTUD1Q5VV17 481 aaPredicted RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 DRICH1Q6PGQ1 229 aaPredicted RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 FBXO38Q6PIJ6 1188 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 BBS12Q6ZW61 710 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 FAM131BQ86XD5 332 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ZDHHC14Q8IZN3 488 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 TTC9BQ8N6N2 239 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 PDZD8Q8NEN9 1154 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ATL2Q8NHH9 583 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 DQX1Q8TE96 717 aaKnown RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 HNRNPLLQ8WVV9 542 aaKnown RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 C1orf54Q8WWF1 131 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 OVCA2Q8WZ82 227 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 EDEM1Q92611 657 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ACSF2Q96CM8 615 aaPredicted RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 FAF2Q96CS3 445 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 RNF157Q96PX1 679 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 CDK5RAP1Q96SZ6 601 aaKnown RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 TTLL2Q9BWV7 592 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ADAM33Q9BZ11 813 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 RAB6CQ9H0N0 254 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ZBP1Q9H171 429 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 SMOC2Q9H3U7 446 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 RXFP1Q9HBX9 757 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 PCDH18Q9HCL0 1135 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ARFGAP3Q9NP61 516 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 GDF3Q9NR23 364 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 TLR8Q9NR97 1041 aaKnown RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 OLA1Q9NTK5 396 aaKnown RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 PIGVQ9NUD9 493 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 DDIT4Q9NX09 232 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 CLIC5Q9NZA1 410 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.84□□□□□ -1.151e-6■□□□□ 9.7
PTP4A1-206ENST00000627002 AMACRQ9UHK6 382 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 DMGDHQ9UI17 866 aaKnown RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 FBXW11Q9UKB1 542 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 ZMYND8Q9ULU4 1186 aaPredicted RBP7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 SLC27A5Q9Y2P5 690 aa7.84□□□□□ -1.15
PTP4A1-206ENST00000627002 TET1Q8NFU7 2136 aa7.84□□□□□ -1.16
PTP4A1-206ENST00000627002 FNDC1Q4ZHG4 1894 aaPredicted RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 SYNJ2BP-COX16A0A087WUM0 186 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 A0A1W2PQH9 124 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 H3BRJ5 948 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 APOC4-APOC2K7ER74 178 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 APOL1O14791 398 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 TTI1O43156 1089 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 IRAK2O43187 625 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 LIASO43766 372 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CST8O60676 142 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 IGLV3-25P01717 112 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 APOC2P02655 101 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CD48P09326 243 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CSH1P0DML2 217 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CSH2P0DML3 217 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 SLC2A3P11169 496 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 RPL17P18621 184 aaKnown RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 TGM2P21980 687 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CTNNB1P35222 781 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 ADRA1BP35368 520 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 PTGIRP43119 386 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CXCR3P49682 368 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 ATXN1P54253 815 aaKnown RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 PITX1P78337 314 aaPredicted RBP7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 UBE3AQ05086 875 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 MTA1Q13330 715 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 PLD1Q13393 1074 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 NNTQ13423 1086 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 CUL1Q13616 776 aa7.83□□□□□ -1.16
PTP4A1-206ENST00000627002 BYSLQ13895 437 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms