RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 DENND1CQ8IV53 801 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 ARHGEF19Q8IW93 802 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 SCML4Q8N228 414 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 MLKLQ8NB16 471 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 RBBP8NLQ8NC74 664 aaPredicted RBP11.35□□□□□ -0.59
SSBP4-215ENST00000625926 MDGA1Q8NFP4 955 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 NETO1Q8TDF5 533 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 SLC35F5Q8WV83 523 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 NDRG1Q92597 394 aaKnown RBP11.35□□□□□ -0.59
SSBP4-215ENST00000625926 PLD4Q96BZ4 506 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 ZSWIM1Q9BR11 485 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 TPSD1Q9BZJ3 242 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 INTS2Q9H0H0 1204 aaKnown RBP11.35□□□□□ -0.59
SSBP4-215ENST00000625926 DUSP15Q9H1R2 295 aaPredicted RBP11.35□□□□□ -0.59
SSBP4-215ENST00000625926 ZDHHC4Q9NPG8 344 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 ABCC13Q9NSE7 274 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 AGO1Q9UL18 857 aaKnown RBP11.35□□□□□ -0.59
SSBP4-215ENST00000625926 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.35□□□□□ -0.59
SSBP4-215ENST00000625926 INVSQ9Y283 1065 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 CACNA1IQ9P0X4 2223 aa11.35□□□□□ -0.59
SSBP4-215ENST00000625926 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 MED19A0JLT2 244 aaPredicted RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 YJEFN3A6XGL0 299 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 E7ENQ6 273 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 M0QYV0 167 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 ZBTB24O43167 697 aaPredicted RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 PENKP01210 267 aaPredicted RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 CYBBP04839 570 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 CISD3P0C7P0 127 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 ZNF806P0C7X5 589 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 HNRNPLP14866 589 aaKnown RBP eCLIP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 BRD2P25440 801 aaKnown RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 NTSR1P30989 418 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 HARS2P49590 506 aaKnown RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 RGS7P49802 495 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 ZNF132P52740 706 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 DAOAP59103 153 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 COL9A2Q14055 689 aaPredicted RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 TRIP4Q15650 581 aaPredicted RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 PMF1Q6P1K2 205 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 ENOSF1Q7L5Y1 443 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 FMNL3Q8IVF7 1028 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 PGBD3Q8N328 593 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 C12orf50Q8NA57 414 aaPredicted RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 OLIG1Q8TAK6 271 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 IRGQQ8WZA9 623 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 EDEM1Q92611 657 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 BHMTQ93088 406 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 HSFY1Q96LI6 401 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 FAM81BQ96LP2 452 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 KREMEN1Q96MU8 473 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 RTKNQ9BST9 563 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 UBE2TQ9NPD8 197 aaPredicted RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 PLK2Q9NYY3 685 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 BCCIPQ9P287 314 aaKnown RBP eCLIP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 FBXO10Q9UK96 956 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 CNTN6Q9UQ52 1028 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 HBS1LQ9Y450 684 aaKnown RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 MIA3Q5JRA6 1907 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 PATJQ8NI35 1801 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 FASNP49327 2511 aaKnown RBP11.34□□□□□ -0.59
SSBP4-215ENST00000625926 GVINP1Q7Z2Y8 2422 aa11.34□□□□□ -0.59
SSBP4-215ENST00000625926 WDR87Q6ZQQ6 2873 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 TCRBV21S2A2A0A5A6 115 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 PRRT4C9JH25 899 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 FBXO21O94952 628 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 KRT5P13647 590 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 HOXB2P14652 356 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 ANP32AP39687 249 aaKnown RBP11.33□□□□□ -0.6
SSBP4-215ENST00000625926 MPLP40238 635 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 MFAP3P55082 362 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 BYSLQ13895 437 aaKnown RBP11.33□□□□□ -0.6
SSBP4-215ENST00000625926 CCDC6Q16204 474 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 AASDHQ4L235 1098 aaPredicted RBP11.33□□□□□ -0.6
SSBP4-215ENST00000625926 PLA2G2CQ5R387 149 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 FYB2Q5VWT5 728 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 TOGARAM2Q6ZUX3 1019 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 CHPFQ8IZ52 775 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 CPXM2Q8N436 756 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 HMGB4Q8WW32 186 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 GOLGA1Q92805 767 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 MED15Q96RN5 788 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 CLSTN2Q9H4D0 955 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 VPS45Q9NRW7 570 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 SFMBT1Q9UHJ3 866 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 HCN2Q9UL51 889 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 SLC27A6Q9Y2P4 619 aa11.33□□□□□ -0.6
SSBP4-215ENST00000625926 MAP1BP46821 2468 aaKnown RBP11.32□□□□□ -0.6
SSBP4-215ENST00000625926 GPR179Q6PRD1 2367 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 ANKRD11Q6UB99 2663 aaPredicted RBP11.32□□□□□ -0.6
SSBP4-215ENST00000625926 PIK3R2O00459 728 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 SLC30A4O14863 429 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 MAP3K13O43283 966 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 MED7O43513 233 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 GABBR2O75899 941 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 CAVIN2O95810 425 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 CALCAP01258 141 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 P2RY2P41231 377 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 WASP42768 502 aa11.32□□□□□ -0.6
SSBP4-215ENST00000625926 GPD2P43304 727 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms