RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ATP6V1B1P15313 513 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 EIF4BP23588 611 aaKnown RBP14.59□□□□□ -0.07
LDB3-209ENST00000623056 RPL10AP62906 217 aaKnown RBP14.59□□□□□ -0.07
LDB3-209ENST00000623056 MMRN1Q13201 1228 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 PTPN20Q4JDL3 420 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 PDPK2PQ6A1A2 396 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 C16orf46Q6P387 395 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 TRMT10BQ6PF06 316 aaKnown RBP14.59□□□□□ -0.07
LDB3-209ENST00000623056 UNC5AQ6ZN44 842 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 FRMD7Q6ZUT3 714 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 PQLC1Q8N2U9 271 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 MCPH1Q8NEM0 835 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 CMASQ8NFW8 434 aaPredicted RBP14.59□□□□□ -0.07
LDB3-209ENST00000623056 SYTL5Q8TDW5 730 aaPredicted RBP14.59□□□□□ -0.07
LDB3-209ENST00000623056 TAAR1Q96RJ0 339 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 TRIM56Q9BRZ2 755 aaKnown RBP14.59□□□□□ -0.07
LDB3-209ENST00000623056 Q9H521 79 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 DHX33Q9H6R0 707 aaKnown RBP14.59□□□□□ -0.07
LDB3-209ENST00000623056 TIMMDC1Q9NPL8 285 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 PDLIM7Q9NR12 457 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 PLK2Q9NYY3 685 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 DMTF1Q9Y222 760 aa14.59□□□□□ -0.07
LDB3-209ENST00000623056 H7C0C1 242 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 ZMPSTE24O75844 475 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 STBD1O95210 358 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 CRTAMO95727 393 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 TPP2P29144 1249 aaPredicted RBP14.58□□□□□ -0.08
LDB3-209ENST00000623056 MAGEA8P43361 318 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 ATP5OP48047 213 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 MTTPP55157 894 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 DACT2Q5SW24 774 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 DENND1BQ6P3S1 775 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 PODNQ7Z5L7 613 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 IMPG2Q9BZV3 1241 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 CISHQ9NSE2 258 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 PNPOQ9NVS9 261 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 PSMD13Q9UNM6 376 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 CNTNAP2Q9UHC6 1331 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 ARID2Q68CP9 1835 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 SLC15A5A6NIM6 579 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 FAM159BA6NKW6 160 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 ADCY3O60266 1144 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 DGAT1O75907 488 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 CST3P01034 146 aaPredicted RBP14.58□□□□□ -0.08
LDB3-209ENST00000623056 MIPP30301 263 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 GABRB2P47870 512 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 MYBPC1Q00872 1141 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 CYLC2Q14093 348 aaPredicted RBP14.58□□□□□ -0.08
LDB3-209ENST00000623056 PGM5Q15124 567 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 CNGA3Q16281 694 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 DBN1Q16643 649 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 HSP90AA5PQ58FG0 334 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 PHTF2Q8N3S3 785 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 GAB3Q8WWW8 586 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 MSTO1Q9BUK6 570 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 FRMD8Q9BZ67 464 aaPredicted RBP14.58□□□□□ -0.08
LDB3-209ENST00000623056 SENP6Q9GZR1 1112 aaPredicted RBP14.58□□□□□ -0.08
LDB3-209ENST00000623056 RSAD1Q9HA92 442 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 HOMER2Q9NSB8 354 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 DNAJC28Q9NX36 388 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 C6orf203Q9P0P8 240 aaPredicted RBP14.58□□□□□ -0.08
LDB3-209ENST00000623056 PAK5Q9P286 719 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 HERC5Q9UII4 1024 aaKnown RBP14.58□□□□□ -0.08
LDB3-209ENST00000623056 SERPINA10Q9UK55 444 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 APPL1Q9UKG1 709 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 EMCNQ9ULC0 261 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 PCDHGC3Q9UN70 934 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 PCDHA10Q9Y5I2 948 aa14.58□□□□□ -0.08
LDB3-209ENST00000623056 FAM189A1O60320 539 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 COQ9O75208 318 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 ASS1P00966 412 aaKnown RBP14.57□□□□□ -0.08
LDB3-209ENST00000623056 NCF2P19878 526 aaPredicted RBP14.57□□□□□ -0.08
LDB3-209ENST00000623056 KCNA4P22459 653 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 PCSK6P29122 969 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 PTGER2P43116 358 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 ADARP55265 1226 aaKnown RBP14.57□□□□□ -0.08
LDB3-209ENST00000623056 PSMC1P62191 440 aaKnown RBP14.57□□□□□ -0.08
LDB3-209ENST00000623056 GK3PQ14409 553 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 SEZ6Q53EL9 994 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 VWA5B1Q5TIE3 1220 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 STRIP1Q5VSL9 837 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 ATG14Q6ZNE5 492 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 MCF2L2Q86YR7 1114 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 AHI1Q8N157 1196 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 FNIP1Q8TF40 1166 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 CNBD2Q96M20 576 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 ZNF696Q9H7X3 374 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 IFT122Q9HBG6 1241 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 CYTH4Q9UIA0 394 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 RAB26Q9ULW5 256 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 TELO2Q9Y4R8 837 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 AP4B1Q9Y6B7 739 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 MYOCOSA0A1B0GUC4 107 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 H0YCG3 227 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 TNFAIP8O95379 198 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 TRUB2O95900 331 aaKnown RBP14.57□□□□□ -0.08
LDB3-209ENST00000623056 APRTP07741 180 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 SRGAP2CP0DJJ0 459 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 SETSIPP0DME0 302 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 SRGAP2BP0DMP2 458 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms