RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 LCP1P13796 627 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 DGKGP49619 791 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 ZNF132P52740 706 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 BSPRYQ5W0U4 402 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 PRR23CQ6ZRP0 262 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 DGLUCYQ7Z3D6 616 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 MDGA1Q8NFP4 955 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 SLC35F5Q8WV83 523 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 KREMEN1Q96MU8 473 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 ARRDC1-AS1Q9H2J1 176 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 CLSTN2Q9H4D0 955 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 ABCC13Q9NSE7 274 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 PCDHGA5Q9Y5G8 931 aa26.39■■□□□ 1.82
VEGFA-229ENST00000621747 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.39■■□□□ 1.82
VEGFA-229ENST00000621747 WDR87Q6ZQQ6 2873 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 YJEFN3A6XGL0 299 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 E7ENQ6 273 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 TRIM24O15164 1050 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 RGS7P49802 495 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 DAOAP59103 153 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 ENOSF1Q7L5Y1 443 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 DENND1CQ8IV53 801 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 FMNL3Q8IVF7 1028 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 BHMTQ93088 406 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 FAM81BQ96LP2 452 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 ZSWIM1Q9BR11 485 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 DUSP15Q9H1R2 295 aaPredicted RBP26.38■■□□□ 1.81
VEGFA-229ENST00000621747 ZDHHC4Q9NPG8 344 aa26.38■■□□□ 1.81
VEGFA-229ENST00000621747 AGO1Q9UL18 857 aaKnown RBP26.38■■□□□ 1.81
VEGFA-229ENST00000621747 DCLK1O15075 740 aa26.37■■□□□ 1.81
VEGFA-229ENST00000621747 ADAM23O75077 832 aa26.37■■□□□ 1.81
VEGFA-229ENST00000621747 KRT5P13647 590 aa26.37■■□□□ 1.81
VEGFA-229ENST00000621747 HNRNPLP14866 589 aaKnown RBP eCLIP26.37■■□□□ 1.81
VEGFA-229ENST00000621747 GBP1P32455 592 aa26.37■■□□□ 1.81
VEGFA-229ENST00000621747 TPD52L1Q16890 204 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-229ENST00000621747 PMF1Q6P1K2 205 aa26.37■■□□□ 1.81
VEGFA-229ENST00000621747 IRGQQ8WZA9 623 aa26.37■■□□□ 1.81
VEGFA-229ENST00000621747 EDEM1Q92611 657 aa26.37■■□□□ 1.81
VEGFA-229ENST00000621747 HSFY1Q96LI6 401 aa26.37■■□□□ 1.81
VEGFA-229ENST00000621747 UBE2TQ9NPD8 197 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-229ENST00000621747 PLK2Q9NYY3 685 aa26.37■■□□□ 1.81
VEGFA-229ENST00000621747 BCCIPQ9P287 314 aaKnown RBP eCLIP26.37■■□□□ 1.81
VEGFA-229ENST00000621747 CNTN6Q9UQ52 1028 aa26.37■■□□□ 1.81
VEGFA-229ENST00000621747 HBS1LQ9Y450 684 aaKnown RBP26.37■■□□□ 1.81
VEGFA-229ENST00000621747 DMXL1Q9Y485 3027 aa26.36■■□□□ 1.81
VEGFA-229ENST00000621747 PENKP01210 267 aaPredicted RBP26.36■■□□□ 1.81
VEGFA-229ENST00000621747 CYBBP04839 570 aa26.36■■□□□ 1.81
VEGFA-229ENST00000621747 NTSR1P30989 418 aa26.36■■□□□ 1.81
VEGFA-229ENST00000621747 HARS2P49590 506 aaKnown RBP26.36■■□□□ 1.81
VEGFA-229ENST00000621747 TRIP4Q15650 581 aaPredicted RBP26.36■■□□□ 1.81
VEGFA-229ENST00000621747 SDE2Q6IQ49 451 aa26.36■■□□□ 1.81
VEGFA-229ENST00000621747 CPXM2Q8N436 756 aa26.36■■□□□ 1.81
VEGFA-229ENST00000621747 NETO1Q8TDF5 533 aa26.36■■□□□ 1.81
VEGFA-229ENST00000621747 FBXO10Q9UK96 956 aa26.36■■□□□ 1.81
VEGFA-229ENST00000621747 EML5Q05BV3 1969 aa26.36■■□□□ 1.81
VEGFA-229ENST00000621747 DCHS1Q96JQ0 3298 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 TCRBV21S2A2A0A5A6 115 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 CALCAP01258 141 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 CISD3P0C7P0 127 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 MFAP3P55082 362 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 FYB2Q5VWT5 728 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 GBP6Q6ZN66 633 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 TOGARAM2Q6ZUX3 1019 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 HMGB4Q8WW32 186 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 GOLGA1Q92805 767 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 SPACA7Q96KW9 195 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 MED15Q96RN5 788 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 INVSQ9Y283 1065 aa26.35■■□□□ 1.81
VEGFA-229ENST00000621747 MED7O43513 233 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 FBXO21O94952 628 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 HOXB2P14652 356 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 MTIF2P46199 727 aaKnown RBP26.34■■□□□ 1.81
VEGFA-229ENST00000621747 BYSLQ13895 437 aaKnown RBP26.34■■□□□ 1.81
VEGFA-229ENST00000621747 EGFLAMQ63HQ2 1017 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 TRIM65Q6PJ69 517 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 CHPFQ8IZ52 775 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 PGBD3Q8N328 593 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 C12orf50Q8NA57 414 aaPredicted RBP26.34■■□□□ 1.81
VEGFA-229ENST00000621747 OLIG1Q8TAK6 271 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 RTKNQ9BST9 563 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 CRACR2AQ9BSW2 395 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 SFMBT1Q9UHJ3 866 aa26.34■■□□□ 1.81
VEGFA-229ENST00000621747 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.33■■□□□ 1.81
VEGFA-229ENST00000621747 PRRT4C9JH25 899 aa26.33■■□□□ 1.81
VEGFA-229ENST00000621747 PIK3R2O00459 728 aa26.33■■□□□ 1.81
VEGFA-229ENST00000621747 ZNF806P0C7X5 589 aa26.33■■□□□ 1.81
VEGFA-229ENST00000621747 MPLP40238 635 aa26.33■■□□□ 1.81
VEGFA-229ENST00000621747 ATXN1P54253 815 aaKnown RBP26.33■■□□□ 1.81
VEGFA-229ENST00000621747 FAM217AQ8IXS0 508 aa26.33■■□□□ 1.81
VEGFA-229ENST00000621747 NUP62CLQ9H1M0 184 aa26.33■■□□□ 1.81
VEGFA-229ENST00000621747 DACH1Q9UI36 760 aa26.33■■□□□ 1.81
VEGFA-229ENST00000621747 HCN2Q9UL51 889 aa26.33■■□□□ 1.81
VEGFA-229ENST00000621747 SLC27A6Q9Y2P4 619 aa26.33■■□□□ 1.81
VEGFA-229ENST00000621747 SPTBN4Q9H254 2564 aa26.32■■□□□ 1.8
VEGFA-229ENST00000621747 GTPBP10A4D1E9 387 aaKnown RBP26.32■■□□□ 1.8
VEGFA-229ENST00000621747 ZBTB24O43167 697 aaPredicted RBP26.32■■□□□ 1.8
VEGFA-229ENST00000621747 GABBR2O75899 941 aa26.32■■□□□ 1.8
VEGFA-229ENST00000621747 LTFP02788 710 aa26.32■■□□□ 1.8
VEGFA-229ENST00000621747 CCDC6Q16204 474 aa26.32■■□□□ 1.8
VEGFA-229ENST00000621747 MEA1Q16626 185 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms