RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PSTPIP1O43586 416 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 NDUFS3O75489 264 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 PECAM1P16284 738 aaPredicted RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 GARTP22102 1010 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 TARSP26639 723 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 PBLDP30039 288 aaPredicted RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 CDC25CP30307 473 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 SP3Q02447 781 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 SPARCL1Q14515 664 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ANKS1BQ7Z6G8 1248 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 SCUBE3Q8IX30 993 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ABRAQ8N0Z2 381 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 MIPOL1Q8TD10 442 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 SEPT8Q92599 483 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 SLCO2A1Q92959 643 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 RAB3IPQ96QF0 476 aaPredicted RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ANLNQ9NQW6 1124 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 SAE1Q9UBE0 346 aaPredicted RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 THSD7AQ9UPZ6 1657 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 SLX4Q8IY92 1834 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ZDBF2Q9HCK1 2354 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 F8VP50 259 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ASS1P00966 412 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 PRKAR2AP13861 404 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 FOXN2P32314 431 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 PKN2Q16513 984 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ZACNQ401N2 412 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 TNFAIP8L3Q5GJ75 292 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 WLSQ5T9L3 541 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 MON1BQ7L1V2 547 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ZNF677Q86XU0 584 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 CRLF3Q8IUI8 442 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 NUDCD3Q8IVD9 361 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 LMNTD2Q8IXW0 634 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 LRRN4Q8WUT4 740 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 TMEM237Q96Q45 408 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 MAGEB5Q9BZ81 275 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 XPNPEP1Q9NQW7 623 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 NOP53Q9NZM5 478 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 RP1P56715 2156 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 SH3BGRLO75368 114 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 NOMO3P69849 1222 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 EML3Q32P44 896 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 MROH9Q5TGP6 573 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 XRRA1Q6P2D8 792 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 TPGS1Q6ZTW0 290 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 C11orf74Q86VG3 221 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 WDR75Q8IWA0 830 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 STKLD1Q8NE28 680 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 REPS2Q8NFH8 660 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 OR5B17Q8NGF7 314 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 EXD1Q8NHP7 514 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ZNF669Q96BR6 464 aaPredicted RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 FBXL18Q96ME1 805 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 LRRC37BQ96QE4 947 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 COLEC11Q9BWP8 271 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 APOBEC3GQ9HC16 384 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 CISHQ9NSE2 258 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ADA2Q9NZK5 511 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 ZC3H7BQ9UGR2 993 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 PHTF1Q9UMS5 762 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 PTPRJQ12913 1337 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 CNTNAP2Q9UHC6 1331 aa8.55□□□□□ -1.04
PTPDC1-204ENST00000620992 KCNK1O00180 336 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 E2F6O75461 281 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 JCHAINP01591 159 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 TAC1P20366 129 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 PEX19P40855 299 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 ARL4DP49703 201 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 BNIP1Q12981 228 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 USP10Q14694 798 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 TREML2Q5T2D2 321 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 PTRHD1Q6GMV3 140 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 OTOP2Q7RTS6 562 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 RASSF3Q86WH2 238 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 ECHDC2Q86YB7 292 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 SCG3Q8WXD2 468 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 PTPRN2Q92932 1015 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 C17orf75Q9HAS0 396 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 DDX43Q9NXZ2 648 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 HAO1Q9UJM8 370 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 VPS28Q9UK41 221 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 ADGRA2Q96PE1 1338 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 MANSC4A6NHS7 340 aaPredicted RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 CXCL11O14625 94 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 AKR1A1P14550 325 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 SCNN1GP51170 649 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 WDR4P57081 412 aaKnown RBP8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 BFSP2Q13515 415 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 PTK2BQ14289 1009 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 MORF4L2Q15014 288 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 MTFR1Q15390 333 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 FAM182AQ5T1J6 154 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 OVOS1Q6IE37 1185 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 PPP1R2P3Q6NXS1 205 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 MFN1Q8IWA4 741 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 KATNAL2Q8IYT4 538 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 ADGRF2Q8IZF7 708 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 SAMD3Q8N6K7 520 aa8.54□□□□□ -1.04
PTPDC1-204ENST00000620992 V9GYQ6 96 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms