RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 APOL2Q9BQE5 337 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 NTPCRQ9BSD7 190 aaKnown RBP12.7□□□□□ -0.38
SPCS1-206ENST00000619898 TMEM134Q9H6X4 195 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 RIPK3Q9Y572 518 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 DNAJC6O75061 913 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 SMNDC1O75940 238 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 EEF1B2P24534 225 aaKnown RBP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 TMEM62Q0P6H9 643 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 PDCD2Q16342 344 aaPredicted RBP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 KYAT1Q16773 422 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 ACSBG2Q5FVE4 666 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 FAM182AQ5T1J6 154 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 OLFML2BQ68BL8 750 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 RAB44Q7Z6P3 723 aaPredicted RBP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 CPB2Q96IY4 423 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 CPXM1Q96SM3 734 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 HAUS8Q9BT25 410 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 NAT9Q9BTE0 207 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 PFDN4Q9NQP4 134 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 STX18Q9P2W9 335 aaKnown RBP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 KIAA1257Q9ULG3 409 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 USP1O94782 785 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 C6orf222P0C671 652 aaPredicted RBP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 RAG1P15918 1043 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 MGAT1P26572 445 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 GLRBP48167 497 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 PRAMEP78395 509 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 LY6KQ17RY6 165 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 SLC39A4Q6P5W5 647 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 STRA8Q7Z7C7 330 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 LRRC39Q96DD0 335 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 MMP19Q99542 508 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 IL1RAPL1Q9NZN1 696 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 ZMYND8Q9ULU4 1186 aaPredicted RBP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 BARX2Q9UMQ3 279 aaPredicted RBP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 DOT1LQ8TEK3 1739 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 CYB561D2O14569 222 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 TMEM63AO94886 807 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 CSPG5O95196 566 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 THRAP10827 490 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 PAMP19021 973 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 AMPD1P23109 780 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 ROR2Q01974 943 aaKnown RBP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 GAD2Q05329 585 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 MGAT5Q09328 741 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 EFCAB3Q8N7B9 438 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 RNF148Q8N7C7 305 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 BANPQ8N9N5 519 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 TNIP3Q96KP6 325 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 MRPL1Q9BYD6 325 aaKnown RBP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 MRPL40Q9NQ50 206 aaKnown RBP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPCS1-206ENST00000619898 PACSIN3Q9UKS6 424 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 CDYLQ9Y232 598 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 IRS2Q9Y4H2 1338 aa12.69□□□□□ -0.38
SPCS1-206ENST00000619898 ACKR2O00590 384 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 ZMPSTE24O75844 475 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 VNN1O95497 513 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 NPTXRO95502 500 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 SP100P23497 879 aaPredicted RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 IVDP26440 423 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 ZNF143P52747 638 aaPredicted RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 NRLP54845 237 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 LAMB3Q13751 1172 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 ZC3H12AQ5D1E8 599 aaKnown RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 KYAT3Q6YP21 454 aaKnown RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 CCNJLQ8IV13 435 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 GSTCDQ8NEC7 633 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 TFAP2BQ92481 460 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 SERAC1Q96JX3 654 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 FBXL18Q96ME1 805 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 TBCBQ99426 244 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 FZD1Q9UP38 647 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 AFG3L2Q9Y4W6 797 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 LRP5O75197 1615 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 A0A087WZ62 844 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 LACTBL1A8MY62 500 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 METTL7BQ6UX53 244 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 FDXACB1Q9BRP7 624 aaPredicted RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 EFR3BQ9Y2G0 817 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 LYPLA1O75608 230 aaPredicted RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 CLPTM1O96005 669 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 GSTT1P30711 240 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 MLH1P40692 756 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 LAYNQ6UX15 382 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 RNF168Q8IYW5 571 aaPredicted RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 SH3TC2Q8TF17 1288 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 NRDE2Q9H7Z3 1164 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 SSU72Q9NP77 194 aaKnown RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 ERAP1Q9NZ08 941 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 WASF2Q9Y6W5 498 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 C3orf70A6NLC5 250 aaPredicted RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 TBC1D12O60347 775 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 PGK2P07205 417 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 UBA1P22314 1058 aaKnown RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 TAF5Q15542 800 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 ABHD15Q6UXT9 468 aa12.68□□□□□ -0.38
SPCS1-206ENST00000619898 BNC2Q6ZN30 1099 aaPredicted RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 SETD3Q86TU7 594 aaPredicted RBP12.68□□□□□ -0.38
SPCS1-206ENST00000619898 HTR3CQ8WXA8 447 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms