RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 USP3Q9Y6I4 520 aa19.77■□□□□ 0.76
PSPC1-206ENST00000619300 B4GALT3O60512 393 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 LTFP02788 710 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 GOT1P17174 413 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 RBL1P28749 1068 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 LSP1P33241 339 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 ARL4CP56559 192 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 TSPY1Q01534 308 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 GBE1Q04446 702 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 SLC10A2Q12908 348 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-206ENST00000619300 PDIA2Q13087 525 aaKnown RBP19.76■□□□□ 0.75
PSPC1-206ENST00000619300 COLGALT2Q8IYK4 626 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 TAB3Q8N5C8 712 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-206ENST00000619300 SLC7A14Q8TBB6 771 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 SLC9A7Q96T83 725 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 SEZ6LQ9BYH1 1024 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.76■□□□□ 0.75
PSPC1-206ENST00000619300 DMAP1Q9NPF5 467 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-206ENST00000619300 PIGVQ9NUD9 493 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 PAK5Q9P286 719 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 A0A087WUV0 522 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-206ENST00000619300 MAP3K6O95382 1288 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 NCAM1P13591 858 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 AMPD1P23109 780 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 BASP1P80723 227 aaKnown RBP19.76■□□□□ 0.75
PSPC1-206ENST00000619300 FASTKD3Q14CZ7 662 aaKnown RBP19.76■□□□□ 0.75
PSPC1-206ENST00000619300 HP1BP3Q5SSJ5 553 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-206ENST00000619300 PM20D1Q6GTS8 502 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 BHLHA9Q7RTU4 235 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 ZBED8Q8IZ13 594 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 IRGQQ8WZA9 623 aa19.76■□□□□ 0.75
PSPC1-206ENST00000619300 TDRD15B5MCY1 1934 aaKnown RBP19.75■□□□□ 0.75
PSPC1-206ENST00000619300 TCRBV7S3A2A0A539 114 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 IVLP07476 585 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 COL6A1P12109 1028 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 YWHAHQ04917 246 aaPredicted RBP19.75■□□□□ 0.75
PSPC1-206ENST00000619300 GAD2Q05329 585 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 CDKL3Q8IVW4 592 aaPredicted RBP19.75■□□□□ 0.75
PSPC1-206ENST00000619300 TBC1D13Q9NVG8 400 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 RRN3Q9NYV6 651 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 XPO7Q9UIA9 1087 aaKnown RBP19.75■□□□□ 0.75
PSPC1-206ENST00000619300 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.75■□□□□ 0.75
PSPC1-206ENST00000619300 TMEM189-UBE2V1I3L0A0 370 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 ADRA1BP35368 520 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 MMP13P45452 471 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 AIF1P55008 147 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 RNASELQ05823 741 aaKnown RBP19.75■□□□□ 0.75
PSPC1-206ENST00000619300 BFSP2Q13515 415 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 FNBP1LQ5T0N5 605 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 NCBP2-AS2Q69YL0 99 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 SH3TC2Q8TF17 1288 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 PGAP3Q96FM1 320 aaPredicted RBP19.75■□□□□ 0.75
PSPC1-206ENST00000619300 PNPLA8Q9NP80 782 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 TMPRSS4Q9NRS4 437 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 TMEM161AQ9NX61 479 aa19.75■□□□□ 0.75
PSPC1-206ENST00000619300 H3BRJ5 948 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 NBNO60934 754 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 TMEM63AO94886 807 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 SLC45A4Q5BKX6 768 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 EFHC2Q5JST6 749 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 CTU1Q7Z7A3 348 aaKnown RBP19.74■□□□□ 0.75
PSPC1-206ENST00000619300 FAM126BQ8IXS8 530 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 SCML4Q8N228 414 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 ADAM32Q8TC27 787 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 RNF139Q8WU17 664 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 NTAN1Q96AB6 310 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 WDR6Q9NNW5 1121 aaKnown RBP19.74■□□□□ 0.75
PSPC1-206ENST00000619300 ARHGEF4Q9NR80 690 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 ETNK2Q9NVF9 386 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 DTLQ9NZJ0 730 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 TRIM17Q9Y577 477 aa19.74■□□□□ 0.75
PSPC1-206ENST00000619300 E7ESA3 106 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 E7EVH7 732 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 DNM1LO00429 736 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 ENPP3O14638 875 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 F9P00740 461 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 ATP5DP30049 168 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 OR1G1P47890 313 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 PPARDQ03181 441 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 GPNMBQ14956 572 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 MSS51Q4VC12 460 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 KCNT2Q6UVM3 1135 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 BZW1Q7L1Q6 419 aaKnown RBP19.73■□□□□ 0.75
PSPC1-206ENST00000619300 TAOK1Q7L7X3 1001 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 EXOC3L1Q86VI1 746 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 CCDC13Q8IYE1 715 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 PDIK1LQ8N165 341 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 BCAS4Q8TDM0 211 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 FAM193BQ96PV7 902 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-206ENST00000619300 EPN3Q9H201 632 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 RAB6BQ9NRW1 208 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 SAGE1Q9NXZ1 904 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 FBXW11Q9UKB1 542 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 ZMYND8Q9ULU4 1186 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-206ENST00000619300 SRRM3A6NNA2 597 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-206ENST00000619300 CHADO15335 359 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 CDH16O75309 829 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 KCNJ11Q14654 390 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 BSPRYQ5W0U4 402 aa19.73■□□□□ 0.75
PSPC1-206ENST00000619300 C4orf22Q6V702 233 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms