RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 USP19O94966 1318 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 CLTBP09497 229 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 CLEC16AQ2KHT3 1053 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 SLC4A9Q96Q91 983 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 ANKZF1Q9H8Y5 726 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 CITO14578 2027 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 BNIP3LO60238 219 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 LARGE1O95461 756 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 PRKCBP05771 671 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 UQCRBP14927 111 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 TKTP29401 623 aaKnown RBP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 FXR1P51114 621 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 RAD9BQ6WBX8 426 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 OR6B3Q8NGW1 331 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 EXD1Q8NHP7 514 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 MAFIPQ8WZ33 124 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 HPS3Q969F9 1004 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 PFDN5Q99471 154 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 ERGIC3Q9Y282 383 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 COL17A1Q9UMD9 1497 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 DUOX2Q9NRD8 1548 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 NPTX2P47972 431 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 ACADVLP49748 655 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 SEPHS1P49903 392 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 CLCN2P51788 898 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 SLC45A4Q5BKX6 768 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 TTC23Q5W5X9 447 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 SH3TC2Q8TF17 1288 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 FAM49BQ9NUQ9 324 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 KCNJ2P63252 427 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 UBE3CQ15386 1083 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 TTC7BQ86TV6 843 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 UBQLN1Q9UMX0 589 aaKnown RBP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 KIF20BQ96Q89 1820 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 KPNA3O00505 521 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 TRIM3O75382 744 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 RPN2P04844 631 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 ALAS1P13196 640 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 PABPC1LQ4VXU2 614 aaKnown RBP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 STRA8Q7Z7C7 330 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 HIPK1Q86Z02 1210 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 ITFG1Q8TB96 612 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 RAD54BQ9Y620 910 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 ZBTB11O95625 1053 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 ITGALP20701 1170 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 PSMD5Q16401 504 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 FAM131AQ6UXB0 335 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 WDR48Q8TAF3 677 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 PPP1R10Q96QC0 940 aaKnown RBP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 CDRT15Q96T59 188 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 SORCS3Q9UPU3 1222 aa15.41■□□□□ 0.06
COL5A1-208ENST00000618395 RPAP1Q9BWH6 1393 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-208ENST00000618395 CAMTA2O94983 1202 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 BGNP21810 368 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 LIFRP42702 1097 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 GUCA1AP43080 201 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-208ENST00000618395 CDK16Q00536 496 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 SCN1BQ07699 218 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 RBBP4Q09028 425 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 DGKDQ16760 1214 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 UGT3A1Q6NUS8 523 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 ESRP1Q6NXG1 681 aaKnown RBP15.4■□□□□ 0.06
COL5A1-208ENST00000618395 FRMD6Q96NE9 622 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 CHORDC1Q9UHD1 332 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-208ENST00000618395 CNOT7Q9UIV1 285 aaKnown RBP15.4■□□□□ 0.06
COL5A1-208ENST00000618395 SNX9Q9Y5X1 595 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 SORBS3O60504 671 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 RASA1P20936 1047 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 CDC42EP4Q9H3Q1 356 aaKnown RBP15.4■□□□□ 0.06
COL5A1-208ENST00000618395 TOR3AQ9H497 397 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 UBDO15205 165 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 PEX3P56589 373 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 NRG3P56975 720 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 CLN6Q9NWW5 311 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 UBP1Q9NZI7 540 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 RAB21Q9UL25 225 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 HMGXB3Q12766 1538 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 CEBPGP53567 150 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 BLMHQ13867 455 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 DSTYKQ6XUX3 929 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 TPCN2Q8NHX9 752 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 EAF2Q96CJ1 260 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-208ENST00000618395 C3orf18Q9UK00 162 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 CCDC154A6NI56 674 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 ZBTB5O15062 677 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 THEGLP0DJG4 465 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 TPTEP56180 551 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 NME5P56597 212 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 OSTNP61366 133 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 CDH18Q13634 790 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 FASTKQ14296 549 aaKnown RBP15.4■□□□□ 0.06
COL5A1-208ENST00000618395 ARSHQ5FYA8 562 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 RBM12BQ8IXT5 1001 aaKnown RBP15.4■□□□□ 0.06
COL5A1-208ENST00000618395 GAL3ST3Q96A11 431 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 PSME3P61289 254 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 ZNF235Q14590 738 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 RNF43Q68DV7 783 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 EMC1Q8N766 993 aa15.4■□□□□ 0.06
COL5A1-208ENST00000618395 NEDD1Q8NHV4 660 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms