RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 GRXCR1A8MXD5 290 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 KCNU1A8MYU2 1149 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 BHMG1C9JSJ3 638 aaPredicted RBP12.21□□□□□ -0.45
PDPN-211ENST00000617617 GRM6O15303 877 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 CLASP2O75122 1294 aaKnown RBP12.21□□□□□ -0.45
PDPN-211ENST00000617617 GLUD1P00367 558 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 FGGP02679 453 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 KRT1P04264 644 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 HNRNPA1P09651 372 aaKnown RBP eCLIP12.21□□□□□ -0.45
PDPN-211ENST00000617617 SLC2A3P11169 496 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 TAF10Q12962 218 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 GPM6BQ13491 265 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 DAB2IPQ5VWQ8 1189 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 SND1Q7KZF4 910 aaKnown RBP eCLIP12.21□□□□□ -0.45
PDPN-211ENST00000617617 AUTS2Q8WXX7 1259 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 RAPGEF5Q92565 580 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 CDCA3Q99618 268 aaPredicted RBP12.21□□□□□ -0.45
PDPN-211ENST00000617617 SNRNP25Q9BV90 132 aaKnown RBP12.21□□□□□ -0.45
PDPN-211ENST00000617617 OSBPL8Q9BZF1 889 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 LRRC19Q9H756 370 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 MTMR10Q9NXD2 777 aa12.21□□□□□ -0.45
PDPN-211ENST00000617617 LPXNO60711 386 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 TJP3O95049 919 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 L1CAMP32004 1257 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 ATP11AP98196 1134 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 DPYSL3Q14195 570 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 BBS12Q6ZW61 710 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 TDHQ8IZJ6 230 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 SLC7A14Q8TBB6 771 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 AZIN2Q96A70 460 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 CAPZA3Q96KX2 299 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 PSMB7Q99436 277 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 RETREG1Q9H6L5 497 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 MTUS1Q9ULD2 1270 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 HBS1LQ9Y450 684 aaKnown RBP12.21□□□□□ -0.46
PDPN-211ENST00000617617 C2orf16Q68DN1 1984 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 CLUHO75153 1309 aa12.21□□□□□ -0.46
PDPN-211ENST00000617617 GOLGA6L10A0A0M3HER8 536 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 TARSL2A2RTX5 802 aaKnown RBP12.2□□□□□ -0.46
PDPN-211ENST00000617617 ZNF840PA6NDX5 716 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 PRRG1O14668 218 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 SOAT2O75908 522 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 OLFM2O95897 454 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 DNAJB2P25686 324 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 ADRA1BP35368 520 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 TWF1Q12792 350 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 TRIP4Q15650 581 aaPredicted RBP12.2□□□□□ -0.46
PDPN-211ENST00000617617 LONRF2Q1L5Z9 754 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 PABPC1LQ4VXU2 614 aaKnown RBP12.2□□□□□ -0.46
PDPN-211ENST00000617617 SDHAF4Q5VUM1 108 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 MFSD7Q6UXD7 560 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 LEMD2Q8NC56 503 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 C1orf74Q96LT6 269 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 PCDH18Q9HCL0 1135 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 PCYOX1Q9UHG3 505 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 DENND4AQ7Z401 1863 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 HIDE1A8MVS5 230 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 F11P03951 625 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 TUBBP07437 444 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 RARGP13631 454 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 IL4RP24394 825 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 HOXC13P31276 330 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 FNTAP49354 379 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 PGFP49763 221 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 PITX1P78337 314 aaPredicted RBP12.2□□□□□ -0.46
PDPN-211ENST00000617617 PTPROQ16827 1216 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 ARL13BQ3SXY8 428 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 RAB6CQ53S08 254 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 SLC9A4Q6AI14 798 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 DNAJB7Q7Z6W7 309 aaPredicted RBP12.2□□□□□ -0.46
PDPN-211ENST00000617617 TMC8Q8IU68 726 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 KREMEN2Q8NCW0 462 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 RAB6CQ9H0N0 254 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 FAM204AQ9H8W3 233 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 ZDHHC7Q9NXF8 308 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 AP4E1Q9UPM8 1137 aa12.2□□□□□ -0.46
PDPN-211ENST00000617617 PHF2O75151 1096 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 ZMYND10O75800 440 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 ZNF189O75820 626 aaPredicted RBP12.19□□□□□ -0.46
PDPN-211ENST00000617617 OAS1P00973 400 aaKnown RBP12.19□□□□□ -0.46
PDPN-211ENST00000617617 KLRC2P26717 231 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 CHRNA3P32297 505 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 ZNF211Q13398 564 aaPredicted RBP12.19□□□□□ -0.46
PDPN-211ENST00000617617 KCNC3Q14003 757 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 CDO1Q16878 200 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 ATP13A4Q4VNC1 1196 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 ARTNQ5T4W7 220 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 ELMSAN1Q6PJG2 1045 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 ANKS1BQ7Z6G8 1248 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 CCDC185Q8N715 623 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 TTC13Q8NBP0 860 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 KCTD6Q8NC69 237 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 STKLD1Q8NE28 680 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 RNF139Q8WU17 664 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 CASP10Q92851 521 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 ZWILCHQ9H900 591 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 IL21Q9HBE4 155 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDPN-211ENST00000617617 ZMYM5Q9UJ78 669 aa12.19□□□□□ -0.46
PDPN-211ENST00000617617 TMEM265A0A087WTH1 108 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms