RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 NSMCE2Q96MF7 247 aa10.56□□□□□ -0.72
CUL4A-212ENST00000617546 MTMR9Q96QG7 549 aa10.56□□□□□ -0.72
CUL4A-212ENST00000617546 IMPAD1Q9NX62 359 aa10.56□□□□□ -0.72
CUL4A-212ENST00000617546 USP18Q9UMW8 372 aa10.56□□□□□ -0.72
CUL4A-212ENST00000617546 AXIN2Q9Y2T1 843 aa10.56□□□□□ -0.72
CUL4A-212ENST00000617546 UBA6A0AVT1 1052 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 TRAFD1O14545 582 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ABL1P00519 1130 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ACADVLP49748 655 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ZNF135P52742 658 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 NME3Q13232 169 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 MAD2L1Q13257 205 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 FRG1Q14331 258 aaKnown RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 STRA8Q7Z7C7 330 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 TBC1D16Q8TBP0 767 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 GIPC3Q8TF64 312 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 COPS7BQ9H9Q2 264 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 WDR41Q9HAD4 459 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 KBTBD13C9JR72 458 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 MRASO14807 208 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ZNF862O60290 1169 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 FKBP9O95302 570 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 RPL14P50914 215 aaKnown RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 SQLEQ14534 574 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ZNF235Q14590 738 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 SLC15A2Q16348 729 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 LAYNQ6UX15 382 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 FKBP9P1Q75LS8 142 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 CLNKQ7Z7G1 428 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 WDR49Q8IV35 697 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 SP8Q8IXZ3 490 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 C7orf26Q96N11 449 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 SHCBP1LQ9BZQ2 653 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 MOV10Q9HCE1 1003 aaKnown RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 EXOSC4Q9NPD3 245 aaKnown RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ADGRA2Q96PE1 1338 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 RNF103O00237 685 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 NDUFS3O75489 264 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 TCEA3O75764 348 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 NDUFB10O96000 172 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 KRT6CP48668 564 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ACOT2P49753 483 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 SLC18A1P54219 525 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 CASP7P55210 303 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 BMT2Q1RMZ1 405 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 AGKQ53H12 422 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 SPANXN2Q5MJ10 180 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 FAM45BPQ6NSW5 357 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 GADL1Q6ZQY3 521 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 RRM2BQ7LG56 351 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 OTOAQ7RTW8 1153 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 NANOGNBQ7Z5D8 188 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 TLK2Q86UE8 772 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 SNX32Q86XE0 403 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 C8orf59Q8N0T1 100 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 KIF12Q96FN5 646 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 POLG2Q9UHN1 485 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 AP4B1Q9Y6B7 739 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 A0A087X1B8 175 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 LIASO43766 372 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ITGA1P56199 1179 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 TNK2Q07912 1038 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 FASTKQ14296 549 aaKnown RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 SMTNL2Q2TAL5 461 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 TIGD7Q6NT04 549 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 BHLHE22Q8NFJ8 381 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 C17orf50Q8WW18 174 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ABHD8Q96I13 439 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ZFYVE19Q96K21 471 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 DCUN1D5Q9BTE7 237 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 ARMCX1Q9P291 453 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 CRNNQ9UBG3 495 aaPredicted RBP10.55□□□□□ -0.72
CUL4A-212ENST00000617546 DAGLAQ9Y4D2 1042 aa10.55□□□□□ -0.72
CUL4A-212ENST00000617546 DFFAO00273 331 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 TRMUO75648 421 aaKnown RBP10.54□□□□□ -0.72
CUL4A-212ENST00000617546 ADORA2BP29275 332 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 CCDC85BQ15834 202 aaPredicted RBP10.54□□□□□ -0.72
CUL4A-212ENST00000617546 PQLC1Q8N2U9 271 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 SNX31Q8N9S9 440 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 MASTLQ96GX5 879 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 OSBPL6Q9BZF3 934 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 MUC13Q9H3R2 512 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 RMI1Q9H9A7 625 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 SYTL2Q9HCH5 934 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 RAVER2Q9HCJ3 691 aaKnown RBP10.54□□□□□ -0.72
CUL4A-212ENST00000617546 CASS4Q9NQ75 786 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 PRMT7Q9NVM4 692 aaPredicted RBP10.54□□□□□ -0.72
CUL4A-212ENST00000617546 PRR12Q9ULL5 1215 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 KLHL33A6NCF5 533 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 SNAP23O00161 211 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 PDGFRBP09619 1106 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 LCP1P13796 627 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 ADSLP30566 484 aaPredicted RBP10.54□□□□□ -0.72
CUL4A-212ENST00000617546 NAMPTP43490 491 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 HADHBP55084 474 aaKnown RBP10.54□□□□□ -0.72
CUL4A-212ENST00000617546 RAD51Q06609 339 aa10.54□□□□□ -0.72
CUL4A-212ENST00000617546 RIPPLY1Q0D2K3 151 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms