RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 RIPK1Q13546 671 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 MGAT5BQ3V5L5 792 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 FAM153CQ494X1 144 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 ATP13A4Q4VNC1 1196 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 RASIP1Q5U651 963 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 DEFB106AQ8N104 65 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 KLHL23Q8NBE8 558 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 SPPL2BQ8TCT7 592 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 GPR152Q8TDT2 470 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 NOD2Q9HC29 1040 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 KLHL11Q9NVR0 708 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 ASNSD1Q9NWL6 643 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 FAM153AQ9UHL3 310 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 SLC12A6Q9UHW9 1150 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 GOLGA6L10A6NI86 522 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 TNFRSF10BO14763 440 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 PSTPIP1O43586 416 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 HSPA9P38646 679 aaKnown RBP16.62■□□□□ 0.25
DDB2-212ENST00000617022 ELF3P78545 371 aaPredicted RBP16.62■□□□□ 0.25
DDB2-212ENST00000617022 KRT17Q04695 432 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 AP1ARQ63HQ0 302 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 CCHCR1Q8TD31 782 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 CCT6BQ92526 530 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 ACSF2Q96CM8 615 aaPredicted RBP16.62■□□□□ 0.25
DDB2-212ENST00000617022 ADAM33Q9BZ11 813 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 NGRNQ9NPE2 291 aaKnown RBP16.62■□□□□ 0.25
DDB2-212ENST00000617022 RBM12Q9NTZ6 932 aaKnown RBP16.62■□□□□ 0.25
DDB2-212ENST00000617022 PCSK1NQ9UHG2 260 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDB2-212ENST00000617022 PATJQ8NI35 1801 aa16.62■□□□□ 0.25
DDB2-212ENST00000617022 GRXCR1A8MXD5 290 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 DPYSL4O14531 572 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 RNF8O76064 485 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 MYOGP15173 224 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 IL1R2P27930 398 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 MAGEA11P43364 429 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 BYSLQ13895 437 aaKnown RBP16.61■□□□□ 0.25
DDB2-212ENST00000617022 LLGL1Q15334 1064 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 FAM109BQ6ICB4 259 aaPredicted RBP16.61■□□□□ 0.25
DDB2-212ENST00000617022 BHLHA9Q7RTU4 235 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 SPRED2Q7Z698 418 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 EIF1ADQ8N9N8 165 aaKnown RBP16.61■□□□□ 0.25
DDB2-212ENST00000617022 FAM172AQ8WUF8 416 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 C8orf48Q96LL4 319 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 ZWILCHQ9H900 591 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.61■□□□□ 0.25
DDB2-212ENST00000617022 USP3Q9Y6I4 520 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 DAB1O75553 588 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 CSPG5O95196 566 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 GLI1P08151 1106 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 RPSAP08865 295 aaKnown RBP16.61■□□□□ 0.25
DDB2-212ENST00000617022 MIPP30301 263 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 CA8P35219 290 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 MRPS25P82663 173 aaKnown RBP16.61■□□□□ 0.25
DDB2-212ENST00000617022 SLC25A11Q02978 314 aaKnown RBP16.61■□□□□ 0.25
DDB2-212ENST00000617022 SMARCB1Q12824 385 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 SMTNL2Q2TAL5 461 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 DCAF6Q58WW2 860 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 ZFYVE27Q5T4F4 411 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 SYPL2Q5VXT5 272 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 ARCQ7LC44 396 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 RASGEF1CQ8N431 466 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 ACTRT1Q8TDG2 376 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 DDX23Q9BUQ8 820 aaKnown RBP16.61■□□□□ 0.25
DDB2-212ENST00000617022 POPDC2Q9HBU9 364 aa16.61■□□□□ 0.25
DDB2-212ENST00000617022 SART1O43290 800 aaKnown RBP16.6■□□□□ 0.25
DDB2-212ENST00000617022 HEXIM1O94992 359 aaKnown RBP16.6■□□□□ 0.25
DDB2-212ENST00000617022 FGGP02679 453 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 FYNP06241 537 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 HAPLN1P10915 354 aaPredicted RBP16.6■□□□□ 0.25
DDB2-212ENST00000617022 CTNNB1P35222 781 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 MATKP42679 507 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 PITX1P78337 314 aaPredicted RBP16.6■□□□□ 0.25
DDB2-212ENST00000617022 ACAP1Q15027 740 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 SHHQ15465 462 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 KCNT1Q5JUK3 1230 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 PM20D1Q6GTS8 502 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 TBCBQ99426 244 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 ZBP1Q9H171 429 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 EPB41L5Q9HCM4 733 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 MRPL17Q9NRX2 175 aaKnown RBP16.6■□□□□ 0.25
DDB2-212ENST00000617022 ETAA1Q9NY74 926 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 USP18Q9UMW8 372 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 NAALADL1Q9UQQ1 740 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 PLAAQ9Y263 795 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 NR2E3Q9Y5X4 410 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 LINC01553A4QN01 128 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 PGRMC1O00264 195 aaKnown RBP16.6■□□□□ 0.25
DDB2-212ENST00000617022 ARHGEF15O94989 841 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 LTFP02788 710 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 PTPN9P43378 593 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 ATXN1P54253 815 aaKnown RBP16.6■□□□□ 0.25
DDB2-212ENST00000617022 USP46P62068 366 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 QPCTQ16769 361 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 HADHQ16836 314 aaKnown RBP16.6■□□□□ 0.25
DDB2-212ENST00000617022 SEL1L2Q5TEA6 688 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 ADAT2Q7Z6V5 191 aaKnown RBP16.6■□□□□ 0.25
DDB2-212ENST00000617022 NUP93Q8N1F7 819 aa16.6■□□□□ 0.25
DDB2-212ENST00000617022 C2orf15Q8WU43 125 aaKnown RBP16.6■□□□□ 0.25
DDB2-212ENST00000617022 EDEM1Q92611 657 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms