RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PWP2Q15269 919 aaKnown RBP13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 UGP2Q16851 508 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 C10orf120Q5SQS8 335 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 CES3Q6UWW8 571 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 NETO2Q8NC67 525 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 DDX1Q92499 740 aaKnown RBP13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 LRRC40Q9H9A6 602 aa13.62□□□□□ -0.23
PPP4R3B-206ENST00000616407 NHSQ6T4R5 1651 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 SHANK3Q9BYB0 1731 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 ALOX15BO15296 676 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 ETFBP38117 255 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 PMF1Q6P1K2 205 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 CCNJLQ8IV13 435 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 PCSK9Q8NBP7 692 aaKnown RBP13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 CKAP2Q8WWK9 683 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 ZDHHC18Q9NUE0 388 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 MYH11P35749 1972 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 UBA6A0AVT1 1052 aaPredicted RBP13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 USP12O75317 370 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 CRYBB1P53674 252 aaPredicted RBP13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 TAF5Q15542 800 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 CYP1B1Q16678 543 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 ILDR2Q71H61 639 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 ANKRD23Q86SG2 305 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 CHSY1Q86X52 802 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 FNIP1Q8TF40 1166 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 WNT8BQ93098 351 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 ADAM2Q99965 735 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 KIF9Q9HAQ2 790 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 HMGXB4Q9UGU5 601 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 STYXL1Q9Y6J8 313 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 SMIM35A0A1B0GVV1 85 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 WDR27A2RRH5 827 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 GOLGA8CPA6NN73 597 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 LGR5O75473 907 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 LTFP02788 710 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 TCF4P15884 667 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 DRD4P21917 467 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 SLC45A4Q5BKX6 768 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 CCDC124Q96CT7 223 aaKnown RBP13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 LRRC4CQ9HCJ2 640 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 NUDT5Q9UKK9 219 aa13.61□□□□□ -0.23
PPP4R3B-206ENST00000616407 DOCK2Q92608 1830 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 NEMP1O14524 444 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 TM9SF1O15321 606 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 AVILO75366 819 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 MGAT1P26572 445 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 OCRLQ01968 901 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 TARBP2Q15633 366 aaKnown RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 N4BP2L2Q92802 583 aaPredicted RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.6□□□□□ -0.239e-14■■■■■ 117.7
PPP4R3B-206ENST00000616407 MTBPQ96DY7 904 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 SMARCD1Q96GM5 515 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 TTC1Q99614 292 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 PCDH18Q9HCL0 1135 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 STOML1Q9UBI4 398 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 ST3GAL5Q9UNP4 418 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 B2RBV5 119 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 SNX3O60493 162 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 LUC7L3O95232 432 aaKnown RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 ABHD2P08910 425 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 GOT1P17174 413 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 TPH1P17752 444 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 FKBP1BP68106 108 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 YWHAHQ04917 246 aaPredicted RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 PCBP1Q15365 356 aaKnown RBP eCLIP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 DBN1Q16643 649 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 QPCTQ16769 361 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 TXNRD3NBQ6F5E7 133 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 FAM117BQ6P1L5 589 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 MTDHQ86UE4 582 aaKnown RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 NKD2Q969F2 451 aaPredicted RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 ZFP42Q96MM3 310 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 UBXN6Q9BZV1 441 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 IPPQ9Y573 584 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 ARAP2Q8WZ64 1704 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 SHOX2O60902 331 aaPredicted RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 LMNAP02545 664 aaKnown RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 ELMO2Q96JJ3 720 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 TWNKQ96RR1 684 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 DSEQ9UL01 958 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 ANGPTL3Q9Y5C1 460 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 SRRM3A6NNA2 597 aaPredicted RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 OPHN1O60890 802 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 ANXA9O76027 345 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 CRADDP78560 199 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 FASTKD3Q14CZ7 662 aaKnown RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 ZNF75CPQ92670 426 aaPredicted RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 RPRD1AQ96P16 312 aaPredicted RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 SARS2Q9NP81 518 aaKnown RBP13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 ABCF3Q9NUQ8 709 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 ARHGEF38Q9NXL2 777 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 TRIM33Q9UPN9 1127 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 EFR3BQ9Y2G0 817 aa13.6□□□□□ -0.23
PPP4R3B-206ENST00000616407 MAP3K7O43318 606 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 MYL2P10916 166 aa13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 NQO1P15559 274 aaKnown RBP13.59□□□□□ -0.23
PPP4R3B-206ENST00000616407 MRPS6P82932 125 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms