RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 FRYQ5TBA9 3013 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 ADAMTS9Q9P2N4 1935 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 ZFHX4Q86UP3 3567 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 A0A1W2PQF6 199 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 A0A1W2PQH9 124 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 TRIM49BA6NDI0 452 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 AP5Z1O43299 807 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 CEACAM1P13688 526 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 PLA2G4AP47712 749 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 PSEN1P49768 467 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 KIF11P52732 1056 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 ZNF252P-AS1Q0IIN9 211 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 STIM1Q13586 685 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 TTI2Q6NXR4 508 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 SLC23A3Q6PIS1 610 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 SLC36A4Q6YBV0 504 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 Q6ZNB5 142 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 TPGS1Q6ZTW0 290 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 ZNF276Q8N554 614 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 SEMA4DQ92854 862 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 SLC35C1Q96A29 364 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 DNAI2Q9GZS0 605 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 CD248Q9HCU0 757 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 CALCOCO1Q9P1Z2 691 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 DNMT3LQ9UJW3 386 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 CHD6Q8TD26 2715 aa19.93■□□□□ 0.78
CDX1-202ENST00000616154 PCNX2A6NKB5 2137 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 PPP1R3GB7ZBB8 358 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 MDM4O15151 490 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 PMM2O15305 246 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 CD58P19256 250 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 WASP42768 502 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 C10orf120Q5SQS8 335 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 SDE2Q6IQ49 451 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 CCDC186Q7Z3E2 898 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 TADA2BQ86TJ2 420 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 TTC39CQ8N584 583 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 CCDC150Q8NCX0 1101 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 ACOX2Q99424 681 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 GABRG3Q99928 467 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 DUSP16Q9BY84 665 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 METTL14Q9HCE5 456 aaKnown RBP19.92■□□□□ 0.78
CDX1-202ENST00000616154 RAB20Q9NX57 234 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 NAGPAQ9UK23 515 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 USP3Q9Y6I4 520 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 PCDH15Q96QU1 1955 aa19.92■□□□□ 0.78
CDX1-202ENST00000616154 PRRT4C9JH25 899 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 CISD3P0C7P0 127 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 ENGP17813 658 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 ITPKAP23677 461 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 RPL6Q02878 288 aaKnown RBP19.91■□□□□ 0.78
CDX1-202ENST00000616154 UAP1L1Q3KQV9 507 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 CBWD6Q4V339 395 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 CBWD3Q5JTY5 395 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 CBWD5Q5RIA9 395 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 TOGARAM2Q6ZUX3 1019 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 SCD5Q86SK9 330 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 CHPFQ8IZ52 775 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 TRIML1Q8N9V2 468 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 IPO4Q8TEX9 1081 aaKnown RBP19.91■□□□□ 0.78
CDX1-202ENST00000616154 CLSTN2Q9H4D0 955 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 CLIC5Q9NZA1 410 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 ARMCX3Q9UH62 379 aaPredicted RBP19.91■□□□□ 0.78
CDX1-202ENST00000616154 NUDT5Q9UKK9 219 aa19.91■□□□□ 0.78
CDX1-202ENST00000616154 ATXN2Q99700 1313 aaKnown RBP19.91■□□□□ 0.78
CDX1-202ENST00000616154 ZBTB24O43167 697 aaPredicted RBP19.9■□□□□ 0.78
CDX1-202ENST00000616154 ZNF217O75362 1048 aa19.9■□□□□ 0.78
CDX1-202ENST00000616154 STC2O76061 302 aa19.9■□□□□ 0.78
CDX1-202ENST00000616154 DGKGP49619 791 aa19.9■□□□□ 0.78
CDX1-202ENST00000616154 PPP1R26Q5T8A7 1209 aaPredicted RBP19.9■□□□□ 0.78
CDX1-202ENST00000616154 CEP76Q8TAP6 659 aa19.9■□□□□ 0.78
CDX1-202ENST00000616154 CDK5RAP1Q96SZ6 601 aaKnown RBP19.9■□□□□ 0.78
CDX1-202ENST00000616154 MMRN2Q9H8L6 949 aa19.9■□□□□ 0.78
CDX1-202ENST00000616154 WASF3Q9UPY6 502 aa19.9■□□□□ 0.78
CDX1-202ENST00000616154 CACNA1EQ15878 2313 aa19.9■□□□□ 0.78
CDX1-202ENST00000616154 CFAP47Q6ZTR5 3102 aa19.89■□□□□ 0.78
CDX1-202ENST00000616154 IGHV1OR15-9A0A0B4J2B8 117 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 GFRA2O00451 464 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 RALAP11233 206 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 NDUFV2P19404 249 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 MAPK8P45983 427 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 DUOXA1Q1HG43 343 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 KIAA1211LQ6NV74 962 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 RBM43Q6ZSC3 357 aaKnown RBP19.89■□□□□ 0.77
CDX1-202ENST00000616154 TMEM63CQ9P1W3 806 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 FBXO10Q9UK96 956 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 SLC6A14Q9UN76 642 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 ZNF510Q9Y2H8 683 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 IGF2RP11717 2491 aa19.89■□□□□ 0.77
CDX1-202ENST00000616154 BICDL2A1A5D9 508 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 CFIP05156 583 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 PROS1P07225 676 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 MARSP56192 900 aaKnown RBP19.88■□□□□ 0.77
CDX1-202ENST00000616154 ZNF33AQ06730 810 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 FOXC1Q12948 553 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 DCAF17Q5H9S7 520 aaPredicted RBP19.88■□□□□ 0.77
CDX1-202ENST00000616154 ISM2Q6H9L7 571 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 RABEPKQ7Z6M1 372 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 DEFB124Q8NES8 71 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 NELFBQ8WX92 580 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms