RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 AGO4Q9HCK5 861 aaKnown RBP13.61□□□□□ -0.23
MSH6-214ENST00000616033 STK32BQ9NY57 414 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 DHX15O43143 795 aaKnown RBP13.61□□□□□ -0.23
MSH6-214ENST00000616033 SIN3BO75182 1162 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 TFPTP0C1Z6 253 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 RPL10P27635 214 aaKnown RBP13.61□□□□□ -0.23
MSH6-214ENST00000616033 RBL1P28749 1068 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 SLC1A6P48664 564 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 CLCN2P51788 898 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 ITGA9Q13797 1035 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 KRT81Q14533 505 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 ZACNQ401N2 412 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 ANKRD20A4Q4UJ75 823 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 IL31Q6EBC2 164 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 DENND1BQ6P3S1 775 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 TSHZ1Q6ZSZ6 1077 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 TMC7Q7Z402 723 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 SP8Q8IXZ3 490 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.61□□□□□ -0.23
MSH6-214ENST00000616033 ZFP28Q8NHY6 868 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 PPP4R1Q8TF05 950 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 DCUN1D1Q96GG9 259 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 RMDN3Q96TC7 470 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 ZNF510Q9Y2H8 683 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 CDK5RAP2Q96SN8 1893 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 STX16-NPEPL1H3BU86 382 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 K7ERI5 159 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 PLSCR1O15162 318 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 TGDSO95455 350 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 ZBED1O96006 694 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 LDHAP00338 332 aaKnown RBP13.61□□□□□ -0.23
MSH6-214ENST00000616033 AMHP03971 560 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 ACO1P21399 889 aaKnown RBP13.61□□□□□ -0.23
MSH6-214ENST00000616033 SOX11P35716 441 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 MAPK10P53779 464 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 MAP3K10Q02779 954 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 DUS1LQ6P1R4 473 aaKnown RBP13.61□□□□□ -0.23
MSH6-214ENST00000616033 ENOSF1Q7L5Y1 443 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 SESTD1Q86VW0 696 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 THNSL1Q8IYQ7 743 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 UBA3Q8TBC4 463 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 TMC2Q8TDI7 906 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 NKD2Q969F2 451 aaPredicted RBP13.61□□□□□ -0.23
MSH6-214ENST00000616033 SPATA17Q96L03 361 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 CAAP1Q9H8G2 361 aa13.61□□□□□ -0.23
MSH6-214ENST00000616033 KRT38O76015 456 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 PABPC4LP0CB38 370 aaKnown RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 NPR1P16066 1061 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 OSBPP22059 807 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 PRAMEP78395 509 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 PABPC1LQ4VXU2 614 aaKnown RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 PPM1LQ5SGD2 360 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 ARHGEF16Q5VV41 709 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 B3GNT6Q6ZMB0 384 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 CHSY1Q86X52 802 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 DGCR14Q96DF8 476 aaKnown RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 PPP1R16BQ96T49 567 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 TBC1D22BQ9NU19 505 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 DDX43Q9NXZ2 648 aaKnown RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 SPATA7Q9P0W8 599 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 CROCCQ5TZA2 2017 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 SEC24DO94855 1032 aaPredicted RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 MIPP30301 263 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 MLH1P40692 756 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 PTP4A2Q12974 167 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 METTL25Q8N6Q8 603 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 DEPTORQ8TB45 409 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 CISHQ9NSE2 258 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 HSFX1Q9UBD0 423 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 AP4B1Q9Y6B7 739 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 C10orf71Q711Q0 1435 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 CALB1P05937 261 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 SERPINA6P08185 405 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 DHRS4L1P0CG22 281 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 FDFT1P37268 417 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 RPS6P62753 249 aaKnown RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 DMPKQ09013 629 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 Q3C1V9 767 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 ZNF677Q86XU0 584 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 PHF13Q86YI8 300 aaPredicted RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 C10orf107Q8IVU9 208 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 C12orf56Q8IXR9 622 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 GMCL1P1Q8NEA9 526 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 PIWIL2Q8TC59 973 aaKnown RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 GRIN3AQ8TCU5 1115 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 TMA16Q96EY4 203 aaKnown RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 MASTLQ96GX5 879 aa13.6□□□□□ -0.23
MSH6-214ENST00000616033 WDR55Q9H6Y2 383 aaPredicted RBP13.6□□□□□ -0.23
MSH6-214ENST00000616033 ANKRD12Q6UB98 2062 aa13.59□□□□□ -0.23
MSH6-214ENST00000616033 A0A0J9YVX5 310 aa13.59□□□□□ -0.23
MSH6-214ENST00000616033 XPOTO43592 962 aaKnown RBP13.59□□□□□ -0.23
MSH6-214ENST00000616033 MAPTP10636 758 aaKnown RBP13.59□□□□□ -0.23
MSH6-214ENST00000616033 ADORA2AP29274 412 aa13.59□□□□□ -0.23
MSH6-214ENST00000616033 RGS7P49802 495 aa13.59□□□□□ -0.23
MSH6-214ENST00000616033 YWHAZP63104 245 aaKnown RBP13.59□□□□□ -0.23
MSH6-214ENST00000616033 PPIDQ08752 370 aaKnown RBP13.59□□□□□ -0.23
MSH6-214ENST00000616033 PIGHQ14442 188 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms