RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 CCNA2P20248 432 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 POU3F2P20265 443 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 PTX3P26022 381 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 EEF1DP29692 281 aaKnown RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 NUDT1P36639 197 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 YARSP54577 528 aaKnown RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 SIK1P57059 783 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 TUBB4BP68371 445 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CCZ1BP86790 482 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CCZ1P86791 482 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 KIF23Q02241 960 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CCINQ13939 588 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 DOC2AQ14183 400 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 GRIK5Q16478 980 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 DPYSL2Q16555 572 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 LRIT3Q3SXY7 679 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 OXLD1Q5BKU9 147 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 RPS26P11Q5JNZ5 115 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 AARS2Q5JTZ9 985 aaKnown RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 GTF2IRD2BQ6EKJ0 949 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CEP85Q6P2H3 762 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 DNAJB7Q7Z6W7 309 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 GTF2IRD2Q86UP8 949 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 TICAM1Q8IUC6 712 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 MMAAQ8IVH4 418 aaKnown RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 ZBED8Q8IZ13 594 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 ST13P4Q8IZP2 240 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 FMR1NBQ8N0W7 255 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 GJD3Q8N144 294 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 NIPA2Q8N8Q9 360 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 DDHD1Q8NEL9 900 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 ETNPPLQ8TBG4 499 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 RAB3IL1Q8TBN0 382 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 PLEKHO2Q8TD55 490 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 SH3RF3Q8TEJ3 882 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 GRK7Q8WTQ7 553 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 UCMAQ8WVF2 138 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 GAB3Q8WWW8 586 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 VCPIP1Q96JH7 1222 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 IFT74Q96LB3 600 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 C7orf26Q96N11 449 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 TSNARE1Q96NA8 513 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 TMEM237Q96Q45 408 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 TM9SF2Q99805 663 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CDK19Q9BWU1 502 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CARD6Q9BX69 1037 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 PINK1Q9BXM7 581 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 DPH5Q9H2P9 285 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 SP110Q9HB58 689 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 HAUS2Q9NVX0 235 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 MRPL39Q9NYK5 338 aaKnown RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 BTBD7Q9P203 1132 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 SRP68Q9UHB9 627 aaKnown RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 GMEB2Q9UKD1 530 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 ERVK-19Q9WJR5 959 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 IFT52Q9Y366 437 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CBY1Q9Y3M2 126 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 IQSEC2Q5JU85 1478 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 SHANK2Q9UPX8 1470 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CDC42BPAQ5VT25 1732 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 A0A1B0GTQ1 180 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CTAGE15A4D2H0 777 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 KRT87PA6NCN2 255 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 ZSCAN5BA6NJL1 495 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 K7EPI3 171 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 PSMA7O14818 248 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 OPLAHO14841 1288 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 NPC1O15118 1278 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 POLR1CO15160 346 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 SHOXO15266 292 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 FANCGO15287 622 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 SCO2O43819 266 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 FMO6PO60774 539 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 JRKO75564 520 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CIAO1O76071 339 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 UFL1O94874 794 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 PLEKHA8P1O95397 391 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 GALTP07902 379 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 SNRPA1P09661 255 aaKnown RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 H2AFB1P0C5Y9 115 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 H2AFB2P0C5Z0 115 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CTAGE8P0CG41 777 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 PIM1P11309 404 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 ITGA2P17301 1181 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 TATP17735 454 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 PPM1AP35813 382 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 LONP1P36776 959 aaKnown RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 IL6STP40189 918 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 PCP4P48539 62 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 GIPRP48546 466 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 HCAR3P49019 387 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 EIF6P56537 245 aaKnown RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 RNASE9P60153 205 aaKnown RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 RHAGQ02094 409 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 TAP1Q03518 808 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 PFKFB3Q16875 520 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 CCDC58Q4VC31 144 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 TOR1AIP1Q5JTV8 583 aa3.15□□□□□ -1.91
CBWD3-209ENST00000614377 FAM109BQ6ICB4 259 aaPredicted RBP3.15□□□□□ -1.91
CBWD3-209ENST00000614377 DENND5AQ6IQ26 1287 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms