RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 SPACA7Q96KW9 195 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 ZDHHC4Q9NPG8 344 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 VPS45Q9NRW7 570 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 THADAQ6YHU6 1953 aa23.82■■□□□ 1.4
FAM228B-208ENST00000613899 TCRBV21S2A2A0A5A6 115 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 TRIM24O15164 1050 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 HMBSP08397 361 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 GCNT1Q02742 428 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 KCNH2Q12809 1159 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 SF3A2Q15428 464 aaKnown RBP23.81■■□□□ 1.4
FAM228B-208ENST00000613899 CCDC6Q16204 474 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 LCLAT1Q6UWP7 414 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 OLIG1Q8TAK6 271 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 LMO3Q8TAP4 145 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 UBA3Q8TBC4 463 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 PLD4Q96BZ4 506 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 INVSQ9Y283 1065 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.81■■□□□ 1.4
FAM228B-208ENST00000613899 NUP205Q92621 2012 aa23.81■■□□□ 1.4
FAM228B-208ENST00000613899 SLC12A8A0AV02 714 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 MED19A0JLT2 244 aaPredicted RBP23.8■■□□□ 1.4
FAM228B-208ENST00000613899 AFPP02771 609 aaKnown RBP23.8■■□□□ 1.4
FAM228B-208ENST00000613899 KLKB1P03952 638 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 HOXB2P14652 356 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 NTSR1P30989 418 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 PKDCCQ504Y2 493 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 BHLHA9Q7RTU4 235 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 SCML4Q8N228 414 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 HMGB4Q8WW32 186 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 BHMTQ93088 406 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 SRRTQ9BXP5 876 aaKnown RBP23.8■■□□□ 1.4
FAM228B-208ENST00000613899 CNGB3Q9NQW8 809 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 KIAA1468Q9P260 1216 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 AGO1Q9UL18 857 aaKnown RBP23.8■■□□□ 1.4
FAM228B-208ENST00000613899 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.8■■□□□ 1.4
FAM228B-208ENST00000613899 ABCA7Q8IZY2 2146 aa23.8■■□□□ 1.4
FAM228B-208ENST00000613899 GDF9O60383 454 aa23.79■■□□□ 1.4
FAM228B-208ENST00000613899 PENKP01210 267 aaPredicted RBP23.79■■□□□ 1.4
FAM228B-208ENST00000613899 P2RY2P41231 377 aa23.79■■□□□ 1.4
FAM228B-208ENST00000613899 LIMK1P53667 647 aa23.79■■□□□ 1.4
FAM228B-208ENST00000613899 CREB5Q02930 508 aa23.79■■□□□ 1.4
FAM228B-208ENST00000613899 BYSLQ13895 437 aaKnown RBP23.79■■□□□ 1.4
FAM228B-208ENST00000613899 EGFLAMQ63HQ2 1017 aa23.79■■□□□ 1.4
FAM228B-208ENST00000613899 SDE2Q6IQ49 451 aa23.79■■□□□ 1.4
FAM228B-208ENST00000613899 RBBP8NLQ8NC74 664 aaPredicted RBP23.79■■□□□ 1.4
FAM228B-208ENST00000613899 RNF139Q8WU17 664 aa23.79■■□□□ 1.4
FAM228B-208ENST00000613899 TFAP2BQ92481 460 aa23.79■■□□□ 1.4
FAM228B-208ENST00000613899 KAT5Q92993 513 aa23.79■■□□□ 1.4
FAM228B-208ENST00000613899 PLK2Q9NYY3 685 aa23.79■■□□□ 1.4
FAM228B-208ENST00000613899 BCLAF3A2AJT9 711 aaKnown RBP23.78■■□□□ 1.4
FAM228B-208ENST00000613899 DCDC2BA2VCK2 349 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 M0QYV0 167 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 CYBBP04839 570 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 BCKDHBP21953 392 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 CNGA2Q16280 664 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 FYB2Q5VWT5 728 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 TOGARAM2Q6ZUX3 1019 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 RRAGAQ7L523 313 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 DENND1CQ8IV53 801 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 ARHGEF19Q8IW93 802 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 CHPFQ8IZ52 775 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 PGBD3Q8N328 593 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 CPXM2Q8N436 756 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 EHBP1Q8NDI1 1231 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 NDRG1Q92597 394 aaKnown RBP23.78■■□□□ 1.4
FAM228B-208ENST00000613899 ABCC13Q9NSE7 274 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 CHMP5Q9NZZ3 219 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 FBXO10Q9UK96 956 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 HCN2Q9UL51 889 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 SLC27A6Q9Y2P4 619 aa23.78■■□□□ 1.4
FAM228B-208ENST00000613899 HBS1LQ9Y450 684 aaKnown RBP23.78■■□□□ 1.4
FAM228B-208ENST00000613899 PRRT4C9JH25 899 aa23.77■■□□□ 1.4
FAM228B-208ENST00000613899 ZBTB24O43167 697 aaPredicted RBP23.77■■□□□ 1.4
FAM228B-208ENST00000613899 CAVIN2O95810 425 aa23.77■■□□□ 1.4
FAM228B-208ENST00000613899 CISD3P0C7P0 127 aa23.77■■□□□ 1.4
FAM228B-208ENST00000613899 LCP1P13796 627 aa23.77■■□□□ 1.4
FAM228B-208ENST00000613899 BRD2P25440 801 aaKnown RBP23.77■■□□□ 1.4
FAM228B-208ENST00000613899 HARS2P49590 506 aaKnown RBP23.77■■□□□ 1.4
FAM228B-208ENST00000613899 DAOAP59103 153 aa23.77■■□□□ 1.4
FAM228B-208ENST00000613899 TRIP4Q15650 581 aaPredicted RBP23.77■■□□□ 1.4
FAM228B-208ENST00000613899 BSPRYQ5W0U4 402 aa23.77■■□□□ 1.4
FAM228B-208ENST00000613899 FMNL3Q8IVF7 1028 aa23.77■■□□□ 1.4
FAM228B-208ENST00000613899 SLC35F5Q8WV83 523 aa23.77■■□□□ 1.4
FAM228B-208ENST00000613899 INTS2Q9H0H0 1204 aaKnown RBP23.77■■□□□ 1.4
FAM228B-208ENST00000613899 RWDD2AQ9UIY3 292 aa23.77■■□□□ 1.4
FAM228B-208ENST00000613899 YJEFN3A6XGL0 299 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 E7ENQ6 273 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 RNF225M0QZC1 329 aaPredicted RBP23.76■■□□□ 1.39
FAM228B-208ENST00000613899 ZNF132P52740 706 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 CAMK4Q16566 473 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 IL31Q6EBC2 164 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 CYP2U1Q7Z449 544 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 FAM217AQ8IXS0 508 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 RLN3Q8WXF3 142 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 IRGQQ8WZA9 623 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 DDX1Q92499 740 aaKnown RBP23.76■■□□□ 1.39
FAM228B-208ENST00000613899 GABRG3Q99928 467 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 SMOC1Q9H4F8 434 aa23.76■■□□□ 1.39
FAM228B-208ENST00000613899 A0A1W2PQF6 199 aa23.75■■□□□ 1.39
FAM228B-208ENST00000613899 GFRA2O00451 464 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms