RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PPME1Q9Y570 386 aa22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.73■■□□□ 1.23
POLR2J3-220ENST00000613744 H3BRJ5 948 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 SRGAP2CP0DJJ0 459 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 HARSP12081 509 aaKnown RBP22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 ARL2P36404 184 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 ETV4P43268 484 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 INHBCP55103 352 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 FASTKD3Q14CZ7 662 aaKnown RBP22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 C1orf146Q5VVC0 180 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 JADE3Q92613 823 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 HEMGNQ9BXL5 484 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 KLHL4Q9C0H6 718 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 PLK2Q9NYY3 685 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 PEX1O43933 1283 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 BAG2O95816 211 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 UNGP13051 313 aaPredicted RBP22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 ETS2P15036 469 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 GLRA2P23416 452 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 CHN2P52757 468 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 HSP90AA5PQ58FG0 334 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 IER5Q5VY09 327 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 HAUS6Q7Z4H7 955 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 ZNF677Q86XU0 584 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 PPM1KQ8N3J5 372 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 LINC01465Q8N7H1 131 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 RDH13Q8NBN7 331 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 APOPT1Q96IL0 206 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 NLRP4Q96MN2 994 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 C7orf26Q96N11 449 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 TTC1Q99614 292 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 TMEM117Q9H0C3 514 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 WWP1Q9H0M0 922 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 SLC17A7Q9P2U7 560 aa22.72■■□□□ 1.23
POLR2J3-220ENST00000613744 LRRIQ4A6NIV6 560 aa22.71■■□□□ 1.23
POLR2J3-220ENST00000613744 CCNFP41002 786 aa22.71■■□□□ 1.23
POLR2J3-220ENST00000613744 ARSEP51690 589 aa22.71■■□□□ 1.23
POLR2J3-220ENST00000613744 GPX6P59796 221 aa22.71■■□□□ 1.23
POLR2J3-220ENST00000613744 LAMTOR4Q0VGL1 99 aa22.71■■□□□ 1.23
POLR2J3-220ENST00000613744 XXYLT1Q8NBI6 393 aa22.71■■□□□ 1.23
POLR2J3-220ENST00000613744 PAFAH2Q99487 392 aa22.71■■□□□ 1.23
POLR2J3-220ENST00000613744 CNTN3Q9P232 1028 aa22.71■■□□□ 1.23
POLR2J3-220ENST00000613744 PPM1HQ9ULR3 514 aa22.71■■□□□ 1.23
POLR2J3-220ENST00000613744 COQ4Q9Y3A0 265 aa22.71■■□□□ 1.23
POLR2J3-220ENST00000613744 CCDC85CA6NKD9 419 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 LPXNO60711 386 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 SPATA31D3P0C874 917 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 GRIA2P42262 883 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 RPL5P46777 297 aaKnown RBP22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 SLC18A2Q05940 514 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 TRIM60Q495X7 471 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 ANKRD20A4Q4UJ75 823 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 SPATA31D4Q6ZUB0 917 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 NECAB2Q7Z6G3 386 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 EXOC8Q8IYI6 725 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 PCDH9Q9HC56 1237 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 PCDH10Q9P2E7 1040 aa22.7■■□□□ 1.23
POLR2J3-220ENST00000613744 HNRNPRO43390 633 aaKnown RBP22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 FAM155BO75949 473 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 FAM163BP0C2L3 166 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 CPA3P15088 417 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 STIP1P31948 543 aaKnown RBP22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 GPC3P51654 580 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 GPS1Q13098 491 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 CAPSQ13938 189 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 HIF1AQ16665 826 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 KIZQ2M2Z5 673 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 ENOSF1Q7L5Y1 443 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 TTC7BQ86TV6 843 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 SERINC5Q86VE9 423 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 RCOR2Q8IZ40 523 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 HELQQ8TDG4 1101 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 HAUS1Q96CS2 278 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 ATP11BQ9Y2G3 1177 aa22.7■■□□□ 1.22
POLR2J3-220ENST00000613744 CLUHO75153 1309 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 IQANK1A0A1B0GTG1 560 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 SMIM35A0A1B0GVV1 85 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 DENND3A2RUS2 1198 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 CTSHP09668 335 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 VCLP18206 1134 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 NCKAP1LP55160 1127 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 CYLC2Q14093 348 aaPredicted RBP22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 LRRC26Q2I0M4 334 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 RAPH1Q70E73 1250 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 RNF149Q8NC42 400 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 TMEM161BQ8NDZ6 487 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 DCAKDQ8WVC6 231 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 PRICKLE1Q96MT3 831 aaPredicted RBP22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 ACCSQ96QU6 501 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 LBHD1Q9BQE6 289 aaPredicted RBP22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 THTPAQ9BU02 230 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 CDHR5Q9HBB8 845 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 GAS2O43903 313 aaKnown RBP22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 MT-ND3P03897 115 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 NLRP11P59045 1033 aaKnown RBP22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 BPIFB4P59827 614 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 PTPN11Q06124 597 aaPredicted RBP22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 FAM126BQ8IXS8 530 aa22.69■■□□□ 1.22
POLR2J3-220ENST00000613744 DEPTORQ8TB45 409 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms