RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 SPEM1Q8N4L4 309 aa13.25□□□□□ -0.29
CSTF1-208ENST00000613138 CCDC33Q8N5R6 958 aa13.25□□□□□ -0.29
CSTF1-208ENST00000613138 SLC20A1Q8WUM9 679 aa13.25□□□□□ -0.29
CSTF1-208ENST00000613138 EXOC4Q96A65 974 aa13.25□□□□□ -0.29
CSTF1-208ENST00000613138 HSFY1Q96LI6 401 aa13.25□□□□□ -0.29
CSTF1-208ENST00000613138 SLC4A5Q9BY07 1137 aa13.25□□□□□ -0.29
CSTF1-208ENST00000613138 TBC1D14Q9P2M4 693 aa13.25□□□□□ -0.29
CSTF1-208ENST00000613138 AGO1Q9UL18 857 aaKnown RBP13.25□□□□□ -0.29
CSTF1-208ENST00000613138 OTOGLQ3ZCN5 2332 aa13.25□□□□□ -0.29
CSTF1-208ENST00000613138 RALGAPA1Q6GYQ0 2036 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 GOLGA6L7A0A1B0GV03 622 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 F8VZ95 297 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 TSPAN3O60637 253 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 TULP3O75386 442 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 GRAP2O75791 330 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 GFPT2O94808 682 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 ADH1CP00326 375 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 CXCL12P48061 93 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 SGSHP51688 502 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 POLR2FP61218 127 aaKnown RBP13.24□□□□□ -0.29
CSTF1-208ENST00000613138 AMPD2Q01433 879 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 KLHL40Q2TBA0 621 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 PTPN20Q4JDL3 420 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 ARHGAP18Q8N392 663 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 ZNF276Q8N554 614 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 DDX1Q92499 740 aaKnown RBP13.24□□□□□ -0.29
CSTF1-208ENST00000613138 FAM149B1Q96BN6 582 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 MYEOVQ96EZ4 313 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 HHIPQ96QV1 700 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 BBS2Q9BXC9 721 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 CFAP54Q96N23 3096 aa13.24□□□□□ -0.29
CSTF1-208ENST00000613138 PRR23AA6NEV1 266 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 LGALS16A8MUM7 142 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 HOXC11O43248 304 aaPredicted RBP13.23□□□□□ -0.29
CSTF1-208ENST00000613138 MED7O43513 233 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 KAT7O95251 611 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 MMEP08473 750 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 NCAM1P13591 858 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 TYRP14679 529 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 CYP11B1P15538 503 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 CDK11BP21127 795 aaKnown RBP13.23□□□□□ -0.29
CSTF1-208ENST00000613138 DRD1P21728 446 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
CSTF1-208ENST00000613138 TIE1P35590 1138 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 UBXN1Q04323 297 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 GAD2Q05329 585 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 PTK2Q05397 1052 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 IQCB1Q15051 598 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 TRIP4Q15650 581 aaPredicted RBP13.23□□□□□ -0.29
CSTF1-208ENST00000613138 LPAL2Q16609 132 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 FAM183BPQ6ZVS7 135 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 SCML4Q8N228 414 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 DQX1Q8TE96 717 aaKnown RBP13.23□□□□□ -0.29
CSTF1-208ENST00000613138 RNF139Q8WU17 664 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 PNKPQ96T60 521 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 IER2Q9BTL4 223 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 ADAM33Q9BZ11 813 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 ARHGEF4Q9NR80 690 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 ABCC13Q9NSE7 274 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 DNAJC17Q9NVM6 304 aaKnown RBP13.23□□□□□ -0.29
CSTF1-208ENST00000613138 XPO7Q9UIA9 1087 aaKnown RBP13.23□□□□□ -0.29
CSTF1-208ENST00000613138 LSM7Q9UK45 103 aaKnown RBP13.23□□□□□ -0.29
CSTF1-208ENST00000613138 FBXO4Q9UKT5 387 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 PCDHGC3Q9UN70 934 aa13.23□□□□□ -0.29
CSTF1-208ENST00000613138 PRRT4C9JH25 899 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 GFRA3O60609 400 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 CHRNB2P17787 502 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 WASP42768 502 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 CCR3P51677 355 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 JAM2P57087 298 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 COG7P83436 770 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 FYB2Q5VWT5 728 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 MSANTD2Q6P1R3 559 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 RFWD3Q6PCD5 774 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 PHLDB2Q86SQ0 1253 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 TMEM110Q86TL2 294 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 TAC4Q86UU9 113 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 LUZP1Q86V48 1076 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 ALLCQ8N6M5 410 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 KIAA1958Q8N8K9 716 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 USP33Q8TEY7 942 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 IRGQQ8WZA9 623 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 NELL1Q92832 810 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 OTUB2Q96DC9 234 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 PPP1R13BQ96KQ4 1090 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
CSTF1-208ENST00000613138 NAP1L5Q96NT1 182 aaPredicted RBP13.22□□□□□ -0.29
CSTF1-208ENST00000613138 ACOX2Q99424 681 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 STK33Q9BYT3 514 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 CBX8Q9HC52 389 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 STRIP2Q9ULQ0 834 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 GON4LQ3T8J9 2241 aa13.22□□□□□ -0.29
CSTF1-208ENST00000613138 GVINP1Q7Z2Y8 2422 aa13.21□□□□□ -0.29
CSTF1-208ENST00000613138 SYNJ2BP-COX16A0A087WUM0 186 aa13.21□□□□□ -0.29
CSTF1-208ENST00000613138 FBXO21O94952 628 aa13.21□□□□□ -0.29
CSTF1-208ENST00000613138 KLF8O95600 359 aaPredicted RBP13.21□□□□□ -0.29
CSTF1-208ENST00000613138 APODP05090 189 aa13.21□□□□□ -0.29
CSTF1-208ENST00000613138 CISD3P0C7P0 127 aa13.21□□□□□ -0.29
CSTF1-208ENST00000613138 TFE3P19532 575 aaPredicted RBP13.21□□□□□ -0.29
CSTF1-208ENST00000613138 SLC6A4P31645 630 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms