RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 BBIP1A8MTZ0 92 aa9□□□□□ -0.97
TTC28-208ENST00000612946 YES1P07947 543 aa9□□□□□ -0.97
TTC28-208ENST00000612946 TCN1P20061 433 aaPredicted RBP9□□□□□ -0.97
TTC28-208ENST00000612946 STXBP2Q15833 593 aa9□□□□□ -0.97
TTC28-208ENST00000612946 TGFBRAP1Q8WUH2 860 aa9□□□□□ -0.97
TTC28-208ENST00000612946 EEF2KMTQ96G04 330 aa9□□□□□ -0.97
TTC28-208ENST00000612946 NDUFAF1Q9Y375 327 aa9□□□□□ -0.97
TTC28-208ENST00000612946 NRKQ7Z2Y5 1582 aa9□□□□□ -0.97
TTC28-208ENST00000612946 LOC100653049A0A140TA62 436 aa9□□□□□ -0.97
TTC28-208ENST00000612946 TEX46H3BTG2 121 aa9□□□□□ -0.97
TTC28-208ENST00000612946 ENO2P09104 434 aaPredicted RBP9□□□□□ -0.97
TTC28-208ENST00000612946 S100A12P80511 92 aa9□□□□□ -0.97
TTC28-208ENST00000612946 GRM4Q14833 912 aa9□□□□□ -0.97
TTC28-208ENST00000612946 ANKMY2Q8IV38 441 aa9□□□□□ -0.97
TTC28-208ENST00000612946 KRT78Q8N1N4 520 aa9□□□□□ -0.97
TTC28-208ENST00000612946 MAGEB10Q96LZ2 347 aaPredicted RBP9□□□□□ -0.97
TTC28-208ENST00000612946 GPATCH1Q9BRR8 931 aaKnown RBP9□□□□□ -0.97
TTC28-208ENST00000612946 ZNF518BQ9C0D4 1074 aa9□□□□□ -0.97
TTC28-208ENST00000612946 SUGT1Q9Y2Z0 365 aa9□□□□□ -0.97
TTC28-208ENST00000612946 TBX3O15119 743 aa9□□□□□ -0.97
TTC28-208ENST00000612946 KLHL18O94889 574 aa9□□□□□ -0.97
TTC28-208ENST00000612946 FMR1Q06787 632 aaKnown RBP eCLIP9□□□□□ -0.97
TTC28-208ENST00000612946 CNPY1Q3B7I2 92 aa9□□□□□ -0.97
TTC28-208ENST00000612946 FBXO42Q6P3S6 717 aa9□□□□□ -0.97
TTC28-208ENST00000612946 PKN3Q6P5Z2 889 aa9□□□□□ -0.97
TTC28-208ENST00000612946 NOP9Q86U38 636 aaKnown RBP9□□□□□ -0.97
TTC28-208ENST00000612946 L3MBTL3Q96JM7 780 aaPredicted RBP9□□□□□ -0.97
TTC28-208ENST00000612946 OR2B2Q9GZK3 357 aa9□□□□□ -0.97
TTC28-208ENST00000612946 CCDC88CQ9P219 2028 aa9□□□□□ -0.97
TTC28-208ENST00000612946 CCDC88AQ3V6T2 1871 aa9□□□□□ -0.97
TTC28-208ENST00000612946 CLRN2A0PK11 232 aa9□□□□□ -0.97
TTC28-208ENST00000612946 SLC22A1O15245 554 aa9□□□□□ -0.97
TTC28-208ENST00000612946 SLC1A6P48664 564 aa9□□□□□ -0.97
TTC28-208ENST00000612946 RAD51Q06609 339 aa9□□□□□ -0.97
TTC28-208ENST00000612946 SNAP47Q5SQN1 464 aa9□□□□□ -0.97
TTC28-208ENST00000612946 MCFD2Q8NI22 146 aa9□□□□□ -0.97
TTC28-208ENST00000612946 C18orf8Q96DM3 657 aa9□□□□□ -0.97
TTC28-208ENST00000612946 MED15Q96RN5 788 aa9□□□□□ -0.97
TTC28-208ENST00000612946 A0A0X1KG70 313 aa9□□□□□ -0.97
TTC28-208ENST00000612946 REM1O75628 298 aa9□□□□□ -0.97
TTC28-208ENST00000612946 RASA1P20936 1047 aa9□□□□□ -0.97
TTC28-208ENST00000612946 NR4A1P22736 598 aa9□□□□□ -0.97
TTC28-208ENST00000612946 NCALDP61601 193 aa9□□□□□ -0.97
TTC28-208ENST00000612946 KCNJ2P63252 427 aa9□□□□□ -0.97
TTC28-208ENST00000612946 PHC1P78364 1004 aa9□□□□□ -0.97
TTC28-208ENST00000612946 DLG1Q12959 904 aa9□□□□□ -0.97
TTC28-208ENST00000612946 RASAL3Q86YV0 1011 aa9□□□□□ -0.97
TTC28-208ENST00000612946 DDX50Q9BQ39 737 aaKnown RBP9□□□□□ -0.97
TTC28-208ENST00000612946 RTKNQ9BST9 563 aa9□□□□□ -0.97
TTC28-208ENST00000612946 ELOVL6Q9H5J4 265 aa9□□□□□ -0.97
TTC28-208ENST00000612946 SPATA7Q9P0W8 599 aa9□□□□□ -0.97
TTC28-208ENST00000612946 AP4B1Q9Y6B7 739 aa9□□□□□ -0.97
TTC28-208ENST00000612946 KCNK1O00180 336 aa9□□□□□ -0.97
TTC28-208ENST00000612946 RGL2O15211 777 aa9□□□□□ -0.97
TTC28-208ENST00000612946 ANXA9O76027 345 aa9□□□□□ -0.97
TTC28-208ENST00000612946 STAT3P40763 770 aa9□□□□□ -0.97
TTC28-208ENST00000612946 BOLA3Q53S33 107 aa9□□□□□ -0.97
TTC28-208ENST00000612946 ANKRD40Q6AI12 368 aa9□□□□□ -0.97
TTC28-208ENST00000612946 MED28Q9H204 178 aa9□□□□□ -0.97
TTC28-208ENST00000612946 POLR1BQ9H9Y6 1135 aa9□□□□□ -0.97
TTC28-208ENST00000612946 EBF2Q9HAK2 575 aa9□□□□□ -0.97
TTC28-208ENST00000612946 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9□□□□□ -0.97
TTC28-208ENST00000612946 PCYOX1Q9UHG3 505 aa9□□□□□ -0.97
TTC28-208ENST00000612946 DUSP12Q9UNI6 340 aa9□□□□□ -0.97
TTC28-208ENST00000612946 CLTCL1P53675 1640 aa9□□□□□ -0.97
TTC28-208ENST00000612946 DPPA5A6NC42 116 aa9□□□□□ -0.97
TTC28-208ENST00000612946 SUPT3HB4E1H0 165 aa9□□□□□ -0.97
TTC28-208ENST00000612946 SUZ12Q15022 739 aaKnown RBP9□□□□□ -0.97
TTC28-208ENST00000612946 ATG16L2Q8NAA4 619 aa9□□□□□ -0.97
TTC28-208ENST00000612946 OR6P1Q8NGX9 317 aa9□□□□□ -0.97
TTC28-208ENST00000612946 RP9Q8TA86 221 aaKnown RBP9□□□□□ -0.97
TTC28-208ENST00000612946 GCNAQ96QF7 691 aa9□□□□□ -0.97
TTC28-208ENST00000612946 EPB41L4BQ9H329 900 aa9□□□□□ -0.97
TTC28-208ENST00000612946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9□□□□□ -0.971e-6■■■□□ 17.3
TTC28-208ENST00000612946 TRIM10Q9UDY6 481 aa9□□□□□ -0.97
TTC28-208ENST00000612946 NAGPAQ9UK23 515 aa9□□□□□ -0.97
TTC28-208ENST00000612946 THRBP10828 461 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 GALK1P51570 392 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 CDC42P60953 191 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 POU4F1Q01851 419 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 ZNF268Q14587 947 aaPredicted RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 EGFLAMQ63HQ2 1017 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 DENND1BQ6P3S1 775 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 CITED4Q96RK1 184 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 RMDN3Q96TC7 470 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 ERGIC3Q9Y282 383 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 NLRP1Q9C000 1473 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 AKAP8O43823 692 aaKnown RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 SERPINA1P01009 418 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 TSPAN19P0C672 248 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 PRR29P0C7W0 189 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 TGM2P21980 687 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 CRABP2P29373 138 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 TTMPQ5BVD1 217 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 MTX3Q5HYI7 312 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 FOXR1Q6PIV2 292 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 IFNEQ86WN2 208 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 ADAM28Q9UKQ2 775 aa8.99□□□□□ -0.97
TTC28-208ENST00000612946 MYCP01106 439 aaPredicted RBP8.99□□□□□ -0.97
TTC28-208ENST00000612946 GLI1P08151 1106 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms