RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 ATP10DQ9P241 1426 aa11.13□□□□□ -0.63
CNTNAP3B-211ENST00000612828 FLRT2O43155 660 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 HUS1O60921 280 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SCP2P22307 547 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ECHS1P30084 290 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RPL19P84098 196 aaKnown RBP11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 EPHA7Q15375 998 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CFAP206Q8IYR0 622 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C17orf50Q8WW18 174 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CEP170P1Q96L14 293 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TBC1D14Q9P2M4 693 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 LIMA1Q9UHB6 759 aaKnown RBP11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CLASP1Q7Z460 1538 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MFSD11O43934 449 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PPP2R2BQ00005 443 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C11orf91Q3C1V1 193 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PRR5LQ6MZQ0 368 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DOK6Q6PKX4 331 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 LYSMD3Q7Z3D4 306 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SFR1Q86XK3 245 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CNTD1Q8N815 330 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PCDH19Q8TAB3 1148 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CHURC1Q8WUH1 139 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 THUMPD3Q9BV44 507 aaKnown RBP11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CCSER1Q9C0I3 900 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GMEB1Q9Y692 573 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 FAM172BPA6NC97 362 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ATP9AO75110 1047 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RTN2O75298 545 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ERCC2P18074 760 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PAICSP22234 425 aaKnown RBP11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CPA2P48052 419 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MFAP3P55082 362 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DNASE1L3Q13609 305 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C2CD6Q53TS8 623 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DSELQ8IZU8 1212 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DTX3LQ8TDB6 740 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CNDP1Q96KN2 507 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SLC6A15Q9H2J7 730 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ADGRG1Q9Y653 693 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 H2AFZP0C0S5 128 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 AMD1P17707 334 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CHRM3P20309 590 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MAGEA12P43365 314 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TNFAIP1Q13829 316 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TRIM16LQ309B1 348 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ARHGAP15Q53QZ3 475 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TEDDM1Q5T9Z0 273 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 H2AFVQ71UI9 128 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GPRASP2Q96D09 838 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 EPS8L2Q9H6S3 715 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZNF221Q9UK13 617 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PP2D1A8MPX8 630 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DEF8Q6ZN54 512 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 LRRC69Q6ZNQ3 347 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 USP49Q70CQ1 688 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 THAP5Q7Z6K1 395 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TRMT10AQ8TBZ6 339 aaKnown RBP11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MIEF1Q9NQG6 463 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 UVRAGQ9P2Y5 699 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ARL2BPQ9Y2Y0 163 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 H0YCG3 227 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NMT2O60551 498 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 BNIP3Q12983 259 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 METTL16Q86W50 562 aaKnown RBP11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PMEPA1Q969W9 287 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TRAPPC9Q96Q05 1148 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CCNL1Q9UK58 526 aaPredicted RBP11.12□□□□□ -0.63
CNTNAP3B-211ENST00000612828 INPPL1O15357 1258 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TFPIP10646 304 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TGM1P22735 817 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 BAG6P46379 1132 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SLC7A2P52569 658 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CA9Q16790 459 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CERKLQ49MI3 558 aaPredicted RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 COPS4Q9BT78 406 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 HMGXB4Q9UGU5 601 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MED14O60244 1454 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZBTB39O15060 712 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZNF682O95780 498 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CTSHP09668 335 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DHRS4L1P0CG22 281 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CYP2D6P10635 497 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZNF658Q5TYW1 1059 aaPredicted RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PABPC5Q96DU9 382 aaKnown RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PIGSQ96S52 555 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GTPBP2Q9BX10 602 aaKnown RBP11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SAYSD1Q9NPB0 183 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CSF1RP07333 972 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RGS19P49795 217 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GALNT3Q14435 633 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 HLFQ16534 295 aa11.11□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NLNQ9BYT8 704 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms