RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TKTL1P51854 596 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 NME3Q13232 169 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 RASA2Q15283 850 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 ZKSCAN8Q15776 578 aaPredicted RBP14.12□□□□□ -0.15
NEK3-205ENST00000610828 SLC45A4Q5BKX6 768 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 KCNT2Q6UVM3 1135 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 TMEM86AQ8N2M4 240 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 KCTD13Q8WZ19 329 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 MAGEB18Q96M61 343 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 PAAF1Q9BRP4 392 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 UPF3AQ9H1J1 476 aaKnown RBP14.12□□□□□ -0.15
NEK3-205ENST00000610828 ETNK1Q9HBU6 452 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 TMPRSS4Q9NRS4 437 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 FETUBQ9UGM5 382 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 FZD10Q9ULW2 581 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 STAP1Q9ULZ2 295 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 MFHAS1Q9Y4C4 1052 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 TEX264Q9Y6I9 313 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 MYBPHLA2RUH7 354 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 M0QYT0 321 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 FAM163BP0C2L3 166 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 CD52P31358 61 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 MSH2P43246 934 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 YWHAGP61981 247 aaKnown RBP eCLIP14.12□□□□□ -0.15
NEK3-205ENST00000610828 SYPL2Q5VXT5 272 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 NCBP2-AS2Q69YL0 99 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 PCED1BQ96HM7 432 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 KCNK16Q96T55 309 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 XPNPEP3Q9NQH7 507 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 DTLQ9NZJ0 730 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 ABT1Q9ULW3 272 aaKnown RBP14.12□□□□□ -0.15
NEK3-205ENST00000610828 PADI3Q9ULW8 664 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 GIT1Q9Y2X7 761 aa14.12□□□□□ -0.15
NEK3-205ENST00000610828 TCRBV9S1A1TA0A576 114 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 PRPF4O43172 522 aaKnown RBP eCLIP14.11□□□□□ -0.15
NEK3-205ENST00000610828 SNX3O60493 162 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 CAPN15O75808 1086 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 AP1G2O75843 785 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 GHRP10912 638 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 KRT4P19013 534 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 CA4P22748 312 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 WDR4P57081 412 aaKnown RBP14.11□□□□□ -0.15
NEK3-205ENST00000610828 IL9RQ01113 521 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 PRKCZQ05513 592 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 CACNB2Q08289 660 aaPredicted RBP14.11□□□□□ -0.15
NEK3-205ENST00000610828 MGAT3Q09327 533 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 XRCC4Q13426 336 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 ITIH4Q14624 930 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 OTUD1Q5VV17 481 aaPredicted RBP14.11□□□□□ -0.15
NEK3-205ENST00000610828 HEATR6Q6AI08 1181 aaKnown RBP14.11□□□□□ -0.15
NEK3-205ENST00000610828 ADGRD1Q6QNK2 874 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 HFE2Q6ZVN8 426 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 VPS52Q8N1B4 723 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 CYTH2Q99418 400 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 POPDC2Q9HBU9 364 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 CAPN7Q9Y6W3 813 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 CAPN9O14815 690 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 ADAMTS4O75173 837 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 POMCP01189 267 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 TSHRP16473 764 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 RPA3P35244 121 aaPredicted RBP14.11□□□□□ -0.15
NEK3-205ENST00000610828 KCNA10Q16322 511 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 PAN2Q504Q3 1202 aaKnown RBP14.11□□□□□ -0.15
NEK3-205ENST00000610828 PAXIP1Q6ZW49 1069 aaPredicted RBP14.11□□□□□ -0.15
NEK3-205ENST00000610828 FAM35AQ86V20 835 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 NT5C3BQ969T7 300 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 CFAP36Q96G28 342 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 NPY6RQ99463 290 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 ULBP1Q9BZM6 244 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 SMG5Q9UPR3 1016 aaKnown RBP14.11□□□□□ -0.15
NEK3-205ENST00000610828 NR2E3Q9Y5X4 410 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 USP3Q9Y6I4 520 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 TLL2Q9Y6L7 1015 aa14.11□□□□□ -0.15
NEK3-205ENST00000610828 H0YHG0 523 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 I3L4J1 428 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 NRP1O14786 923 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 CREB3O43889 395 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 MGEA5O60502 916 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 METTL18O95568 372 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 ASMTLO95671 621 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 TM4SF4P48230 202 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 DEUP1Q05D60 604 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 UPP1Q16831 310 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 SPRED3Q2MJR0 410 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 KBTBD12Q3ZCT8 623 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 AGGF1Q8N302 714 aaeCLIP14.1□□□□□ -0.15
NEK3-205ENST00000610828 QKIQ96PU8 341 aaKnown RBP eCLIP14.1□□□□□ -0.15
NEK3-205ENST00000610828 SMOQ99835 787 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 DHRS4Q9BTZ2 278 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 FRMD8Q9BZ67 464 aaPredicted RBP14.1□□□□□ -0.15
NEK3-205ENST00000610828 ARHGEF4Q9NR80 690 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 IKBKGQ9Y6K9 419 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 YJEFN3A6XGL0 299 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 E7ENQ6 273 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 GCATO75600 419 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 FSBPO95073 299 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 GBP2P32456 591 aaPredicted RBP14.1□□□□□ -0.15
NEK3-205ENST00000610828 CACNA2D1P54289 1103 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 SPARCL1Q14515 664 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 TIGD5Q53EQ6 642 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms