RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 NACA2Q9H009 215 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 IL21Q9HBE4 155 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 OLA1Q9NTK5 396 aaKnown RBP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 PIGVQ9NUD9 493 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 HCFC1R1Q9NWW0 138 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 PCSK1NQ9UHG2 260 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 SFMBT1Q9UHJ3 866 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 USP18Q9UMW8 372 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 CCDC66A2RUB6 948 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 IRAK2O43187 625 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 MSI1O43347 362 aaKnown RBP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 GLP2RO95838 553 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 TBX18O95935 607 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 F9P00740 461 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 IGLV3-25P01717 112 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 MYL4P12829 197 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 PTPN2P17706 415 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 CTNNA2P26232 953 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 GBP1P32455 592 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 HADHQ16836 314 aaKnown RBP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 SMTNL2Q2TAL5 461 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 HECTD3Q5T447 861 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 MSANTD2Q6P1R3 559 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 SCYL2Q6P3W7 929 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 TMC5Q6UXY8 1006 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 GAREM2Q75VX8 874 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 PDZD4Q76G19 769 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 SND1Q7KZF4 910 aaKnown RBP eCLIP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 FAM131BQ86XD5 332 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 C12orf76Q8N812 135 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 ZNF707Q96C28 371 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 PGAP3Q96FM1 320 aaPredicted RBP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 FAM161BQ96MY7 647 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 SERPINB11Q96P15 392 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 PEBP4Q96S96 227 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 NCAPGQ9BPX3 1015 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 ZWILCHQ9H900 591 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 TRPC7Q9HCX4 862 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 DNMT3BQ9UBC3 853 aaKnown RBP11.6□□□□□ -0.55
CTCFL-214ENST00000608108 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 MTCH2Q9Y6C9 303 aa11.6□□□□□ -0.55
CTCFL-214ENST00000608108 HELZP42694 1942 aaKnown RBP11.59□□□□□ -0.55
CTCFL-214ENST00000608108 A0A1W2PRU2 124 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 MDM4O15151 490 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 DDX3YO15523 660 aaKnown RBP11.59□□□□□ -0.55
CTCFL-214ENST00000608108 LINC01565O15544 149 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 ENDOD1O94919 500 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 FGF19O95750 216 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 OAS1P00973 400 aaKnown RBP11.59□□□□□ -0.55
CTCFL-214ENST00000608108 RHOP08100 348 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 KRT7P08729 469 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 IL1R2P27930 398 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 ATP5C1P36542 298 aaKnown RBP11.59□□□□□ -0.55
CTCFL-214ENST00000608108 EPHA5P54756 1037 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 CYP4F8P98187 520 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 ADGRE1Q14246 886 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 ZFYVE27Q5T4F4 411 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 LRRC38Q5VT99 294 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 PAPD7Q5XG87 772 aaKnown RBP11.59□□□□□ -0.55
CTCFL-214ENST00000608108 TXNRD3NBQ6F5E7 133 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 TMEM184AQ6ZMB5 413 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 POLNQ7Z5Q5 900 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 GRASPQ7Z6J2 395 aaPredicted RBP11.59□□□□□ -0.55
CTCFL-214ENST00000608108 MIB1Q86YT6 1006 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 ZNF276Q8N554 614 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 LEMD2Q8NC56 503 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 UBE2Q2Q8WVN8 375 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 SMG7Q92540 1137 aaKnown RBP11.59□□□□□ -0.55
CTCFL-214ENST00000608108 MRPS31Q92665 395 aaKnown RBP11.59□□□□□ -0.55
CTCFL-214ENST00000608108 ALG3Q92685 438 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 ATXN3LQ9H3M9 355 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 PIDD1Q9HB75 910 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 WDR6Q9NNW5 1121 aaKnown RBP11.59□□□□□ -0.55
CTCFL-214ENST00000608108 KLHL11Q9NVR0 708 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 MARCH2Q9P0N8 246 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 RASAL2Q9UJF2 1139 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 SNX12Q9UMY4 172 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 PCDHA3Q9Y5H8 950 aa11.59□□□□□ -0.55
CTCFL-214ENST00000608108 C2orf78A6NCI8 922 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 KCNK3O14649 394 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 COCHO43405 550 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 GJA1P17302 382 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 IGFBP4P22692 258 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 CXCR5P32302 372 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 CCR2P41597 374 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 PEX5P50542 639 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 RWDD2BP57060 319 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 SLC5A9Q2M3M2 681 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 KCNT1Q5JUK3 1230 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 TXNDC8Q6A555 127 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 KLHDC10Q6PID8 442 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 CYP4V2Q6ZWL3 525 aaPredicted RBP11.58□□□□□ -0.56
CTCFL-214ENST00000608108 CCDC185Q8N715 623 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 CMASQ8NFW8 434 aaPredicted RBP11.58□□□□□ -0.56
CTCFL-214ENST00000608108 SHKBP1Q8TBC3 707 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 RNF34Q969K3 372 aa11.58□□□□□ -0.56
CTCFL-214ENST00000608108 ACSF2Q96CM8 615 aaPredicted RBP11.58□□□□□ -0.56
CTCFL-214ENST00000608108 OSBPL9Q96SU4 736 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms