RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 SUMO4Q6EEV6 95 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 KLHL17Q6TDP4 642 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 ZNF551Q7Z340 670 aaPredicted RBP6.29□□□□□ -1.4
LINC00458-206ENST00000607494 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINC00458-206ENST00000607494 TTYH3Q9C0H2 523 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 UBN1Q9NPG3 1134 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 SERTAD4Q9NUC0 356 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 SH3BP4Q9P0V3 963 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 XPR1Q9UBH6 696 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 ZNF804BA4D1E1 1349 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 LOC102723971A0A1B0GUV8 181 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 DYTNA2CJ06 578 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 TARM1B6A8C7 271 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 TISP43B9A030 160 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 B9A039 149 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 hCG_1984214I3L0E3 225 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 HOXC11O43248 304 aaPredicted RBP6.28□□□□□ -1.4
LINC00458-206ENST00000607494 PIM1P11309 404 aaPredicted RBP6.28□□□□□ -1.4
LINC00458-206ENST00000607494 NPPBP16860 134 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 XBP1P17861 261 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 CAPN3P20807 821 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 CST5P28325 142 aaPredicted RBP6.28□□□□□ -1.4
LINC00458-206ENST00000607494 EPHB2P29323 1055 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 KRT9P35527 623 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 ADD2P35612 726 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 KIAA1614Q5VZ46 1190 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 FAM160B1Q5W0V3 765 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 CRTC1Q6UUV9 634 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 ZDHHC24Q6UX98 284 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 TBC1D1Q86TI0 1168 aaPredicted RBP6.28□□□□□ -1.4
LINC00458-206ENST00000607494 CCDC89Q8N998 374 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 ATRIPQ8WXE1 791 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 HDAC2Q92769 488 aaKnown RBP6.28□□□□□ -1.4
LINC00458-206ENST00000607494 SLC46A1Q96NT5 459 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 OSBPL5Q9H0X9 879 aaPredicted RBP6.28□□□□□ -1.4
LINC00458-206ENST00000607494 PCDHAC1Q9H158 963 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 DHX36Q9H2U1 1008 aaKnown RBP6.28□□□□□ -1.4
LINC00458-206ENST00000607494 MLXIPQ9HAP2 919 aa6.28□□□□□ -1.4
LINC00458-206ENST00000607494 ZMYND8Q9ULU4 1186 aaPredicted RBP6.28□□□□□ -1.4
LINC00458-206ENST00000607494 RAB27BO00194 218 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 IFIT1P09914 478 aaKnown RBP6.27□□□□□ -1.41
LINC00458-206ENST00000607494 XRCC6P12956 609 aaKnown RBP eCLIP6.27□□□□□ -1.41
LINC00458-206ENST00000607494 PAPOLAP51003 745 aaKnown RBP6.27□□□□□ -1.41
LINC00458-206ENST00000607494 ZNF134P52741 427 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 WNT3P56703 355 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 TLE2Q04725 743 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 PDE1CQ14123 709 aaPredicted RBP6.27□□□□□ -1.41
LINC00458-206ENST00000607494 ARHGEF7Q14155 803 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.27□□□□□ -1.41
LINC00458-206ENST00000607494 TMTC4Q5T4D3 741 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 LAYNQ6UX15 382 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 PPP1R32Q7Z5V6 425 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 C2CD5Q86YS7 1000 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 CPOQ8IVL8 374 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 HERC6Q8IVU3 1022 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 CCDC117Q8IWD4 279 aaPredicted RBP6.27□□□□□ -1.41
LINC00458-206ENST00000607494 TMTC2Q8N394 836 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 PDILTQ8N807 584 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 PCYOX1LQ8NBM8 494 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 RAPGEF4Q8WZA2 1011 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 HERVK_113Q902F9 699 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 RILPL2Q969X0 211 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 REPS1Q96D71 796 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 MAELQ96JY0 434 aaKnown RBP6.27□□□□□ -1.41
LINC00458-206ENST00000607494 PPP1R9BQ96SB3 815 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 XPNPEP3Q9NQH7 507 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 FEM1BQ9UK73 627 aa6.27□□□□□ -1.41
LINC00458-206ENST00000607494 A6NLC8 198 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 PROB1E7EW31 1015 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 SMIM22K7EJ46 135 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 FCHO1O14526 889 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 ZNF213O14771 459 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 CCP110O43303 1012 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 BAIAP3O94812 1187 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 NXPH3O95157 252 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 LATS1O95835 1130 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 GLP2RO95838 553 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 CYP2C9P11712 490 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 VIPR2P41587 438 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 CPT1AP50416 773 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 CLCN2P51788 898 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 PNLIPRP1P54315 467 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 TCF15Q12870 199 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 SLC5A9Q2M3M2 681 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 PROSER3Q2NL68 480 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 TRIM71Q2Q1W2 868 aaKnown RBP6.26□□□□□ -1.41
LINC00458-206ENST00000607494 RAP1GAP2Q684P5 730 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 PLAG1Q6DJT9 500 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 C11orf87Q6NUJ2 197 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 CCDC28AQ8IWP9 274 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 FAM109AQ8N4B1 249 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 THAP4Q8WY91 577 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 ZBTB9Q96C00 473 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 DDX23Q9BUQ8 820 aaKnown RBP6.26□□□□□ -1.41
LINC00458-206ENST00000607494 PABPC3Q9H361 631 aaKnown RBP6.26□□□□□ -1.41
LINC00458-206ENST00000607494 ZSCAN32Q9NX65 697 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 SERTAD3Q9UJW9 196 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 CA14Q9ULX7 337 aa6.26□□□□□ -1.41
LINC00458-206ENST00000607494 RABGAP1Q9Y3P9 1069 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 272.8 ms