RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 CLEC4CQ8WTT0 213 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 NKD2Q969F2 451 aaPredicted RBP17.31■□□□□ 0.36
LINC00240-203ENST00000606878 PLD4Q96BZ4 506 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 PPP1R13BQ96KQ4 1090 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 TRIM62Q9BVG3 475 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 BBS2Q9BXC9 721 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 ARHGEF4Q9NR80 690 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 CYTH4Q9UIA0 394 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 DAAM1Q9Y4D1 1078 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 CEP83Q9Y592 693 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 PCDHGA2Q9Y5H1 932 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 R4GN57 208 aa17.31■□□□□ 0.36
LINC00240-203ENST00000606878 TBC1D3BA6NDS4 549 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 LGALS16A8MUM7 142 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 K7EQS6 105 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 CAPN9O14815 690 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 KAT7O95251 611 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 PAPSS2O95340 614 aaPredicted RBP17.3■□□□□ 0.36
LINC00240-203ENST00000606878 PNMA6AP0CW24 399 aaPredicted RBP17.3■□□□□ 0.36
LINC00240-203ENST00000606878 NCAM1P13591 858 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 TNFRSF4P43489 277 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 POLR2FP61218 127 aaKnown RBP17.3■□□□□ 0.36
LINC00240-203ENST00000606878 PDCLQ13371 301 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 SYCP1Q15431 976 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 SKOR2Q2VWA4 1001 aaPredicted RBP17.3■□□□□ 0.36
LINC00240-203ENST00000606878 MSANTD2Q6P1R3 559 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 BEND5Q7L4P6 421 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 PASD1Q8IV76 773 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 NELL1Q92832 810 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 FAM149B1Q96BN6 582 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 HSD3B7Q9H2F3 369 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 FAM207AQ9NSI2 230 aaPredicted RBP17.3■□□□□ 0.36
LINC00240-203ENST00000606878 MARK1Q9P0L2 795 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 AGO1Q9UL18 857 aaKnown RBP17.3■□□□□ 0.36
LINC00240-203ENST00000606878 SLC8A2Q9UPR5 921 aa17.3■□□□□ 0.36
LINC00240-203ENST00000606878 PATJQ8NI35 1801 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 E5RJQ4 531 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 NEDD8-MDP1E9PL57 170 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 PAPSS1O43252 624 aaPredicted RBP17.29■□□□□ 0.36
LINC00240-203ENST00000606878 TULP3O75386 442 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 TYRP14679 529 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 CYP11B1P15538 503 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 HOXA6P31267 233 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 KLK7P49862 253 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 YWHAZP63104 245 aaKnown RBP17.29■□□□□ 0.36
LINC00240-203ENST00000606878 C12orf40Q86WS4 652 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 UNC45BQ8IWX7 931 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 ETFBKMTQ8IXQ9 262 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 ZBTB44Q8NCP5 570 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 TMEM35BQ8NCS4 154 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 NEK11Q8NG66 645 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 RPLP0P6Q8NHW5 317 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 EZH1Q92800 747 aaPredicted RBP17.29■□□□□ 0.36
LINC00240-203ENST00000606878 GANQ9H2C0 597 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 SYNCQ9H7C4 482 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 SIK3Q9Y2K2 1263 aa17.29■□□□□ 0.36
LINC00240-203ENST00000606878 KIF26AQ9ULI4 1882 aaPredicted RBP17.29■□□□□ 0.36
LINC00240-203ENST00000606878 SYCE3A1L190 88 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 F8VZ95 297 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 CYBBP04839 570 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 FYNP06241 537 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 TDGF1P13385 188 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 ATP1A3P13637 1013 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 MRPS21P82921 87 aaKnown RBP17.28■□□□□ 0.36
LINC00240-203ENST00000606878 FILIP1LQ4L180 1135 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 C2orf27AQ580R0 203 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 EFHC1Q5JVL4 640 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 PKN3Q6P5Z2 889 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 DHX40Q8IX18 779 aaKnown RBP17.28■□□□□ 0.36
LINC00240-203ENST00000606878 USP33Q8TEY7 942 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 ACDQ96AP0 544 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 SPAG5Q96R06 1193 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 ERGIC2Q96RQ1 377 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 CPXM1Q96SM3 734 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 POPDC2Q9HBU9 364 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 NLRC4Q9NPP4 1024 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 DNAJC17Q9NVM6 304 aaKnown RBP17.28■□□□□ 0.36
LINC00240-203ENST00000606878 C2orf42Q9NWW7 574 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 NAALADL1Q9UQQ1 740 aa17.28■□□□□ 0.36
LINC00240-203ENST00000606878 HELZP42694 1942 aaKnown RBP17.27■□□□□ 0.36
LINC00240-203ENST00000606878 MYOFQ9NZM1 2061 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 K7ESF4 209 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 CACNG3O60359 315 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 GLI1P08151 1106 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 STAT1P42224 750 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 SEC13P55735 322 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 TBX4P57082 545 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 KDSRQ06136 332 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 ADGRF1Q5T601 910 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 GRAMD4Q6IC98 578 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 OR6B2Q6IFH4 312 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 SYT13Q7L8C5 426 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 APTXQ7Z2E3 356 aaKnown RBP17.27■□□□□ 0.36
LINC00240-203ENST00000606878 CPXM2Q8N436 756 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 CAMKK1Q8N5S9 505 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 C1orf131Q8NDD1 294 aaKnown RBP17.27■□□□□ 0.36
LINC00240-203ENST00000606878 KCNV2Q8TDN2 545 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 IPO4Q8TEX9 1081 aaKnown RBP17.27■□□□□ 0.36
LINC00240-203ENST00000606878 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.36
LINC00240-203ENST00000606878 EP300Q09472 2414 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms