RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 TMEM130Q8N3G9 435 aa13.01□□□□□ -0.33
HLA-F-230ENST00000606273 ZSWIM2Q8NEG5 633 aa13.01□□□□□ -0.33
HLA-F-230ENST00000606273 OSCP1Q8WVF1 389 aa13.01□□□□□ -0.33
HLA-F-230ENST00000606273 SCFD1Q8WVM8 642 aa13.01□□□□□ -0.33
HLA-F-230ENST00000606273 TIGD1Q96MW7 591 aa13.01□□□□□ -0.33
HLA-F-230ENST00000606273 DUS2Q9NX74 493 aaKnown RBP13.01□□□□□ -0.33
HLA-F-230ENST00000606273 KCNG1Q9UIX4 513 aa13.01□□□□□ -0.33
HLA-F-230ENST00000606273 J3QKU1 62 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 HNRNPDLO14979 420 aaKnown RBP13□□□□□ -0.33
HLA-F-230ENST00000606273 FAM189A1O60320 539 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 CBFA2T3O75081 653 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 TOM1L1O75674 476 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 SYPP08247 313 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 DDX6P26196 483 aaKnown RBP eCLIP13□□□□□ -0.33
HLA-F-230ENST00000606273 TNFSF9P41273 254 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 AARSP49588 968 aaKnown RBP eCLIP13□□□□□ -0.33
HLA-F-230ENST00000606273 LIG4P49917 911 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 NLRP12P59046 1061 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 MCL1Q07820 350 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 BYSLQ13895 437 aaKnown RBP13□□□□□ -0.33
HLA-F-230ENST00000606273 ZNF268Q14587 947 aaPredicted RBP13□□□□□ -0.33
HLA-F-230ENST00000606273 VEPH1Q14D04 833 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 MON1AQ86VX9 555 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 DEFB119Q8N690 84 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 ZNF507Q8TCN5 953 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 GPT2Q8TD30 523 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 GIPC2Q8TF65 315 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 BICD1Q96G01 975 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 GBP4Q96PP9 640 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 EXOC1Q9NV70 894 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 TUBGCP4Q9UGJ1 667 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 PCDHA5Q9Y5H7 936 aa13□□□□□ -0.33
HLA-F-230ENST00000606273 A0A0B4J269 797 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 TGFB1I1O43294 461 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 RHOBTB3O94955 611 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 MYL1P05976 194 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 MCF2P10911 925 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 HMGA1P17096 107 aaKnown RBP12.99□□□□□ -0.33
HLA-F-230ENST00000606273 MRPS21P82921 87 aaKnown RBP12.99□□□□□ -0.33
HLA-F-230ENST00000606273 MTF1Q14872 753 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 TAF12Q16514 161 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 CAMK4Q16566 473 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 SLC10A6Q3KNW5 377 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 MGAT5BQ3V5L5 792 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 OVOS1Q6IE37 1185 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 ARMCX5Q6P1M9 558 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 RABEPKQ7Z6M1 372 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 MARCH9Q86YJ5 346 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 NAXDQ8IW45 347 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 NELFCDQ8IXH7 590 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 SMYD4Q8IYR2 804 aaPredicted RBP12.99□□□□□ -0.33
HLA-F-230ENST00000606273 SPATA20Q8TB22 786 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 HVCN1Q96D96 273 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 ACCSQ96QU6 501 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 SEPT5Q99719 369 aaPredicted RBP12.99□□□□□ -0.33
HLA-F-230ENST00000606273 TCHPQ9BT92 498 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 PRORYQ9H606 182 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 WNT6Q9Y6F9 365 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 STYXL1Q9Y6J8 313 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 TENM4Q6N022 2769 aa12.99□□□□□ -0.33
HLA-F-230ENST00000606273 KIF26AQ9ULI4 1882 aaPredicted RBP12.99□□□□□ -0.33
HLA-F-230ENST00000606273 ASXL3Q9C0F0 2248 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 ATG2BQ96BY7 2078 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 THADAQ6YHU6 1953 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 C9orf172C9J069 976 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 SGK1O00141 431 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 EIF3DO15371 548 aaKnown RBP eCLIP12.98□□□□□ -0.33
HLA-F-230ENST00000606273 CLDN3O15551 220 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 AP5Z1O43299 807 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 RGS9O75916 674 aaPredicted RBP12.98□□□□□ -0.33
HLA-F-230ENST00000606273 TYMPP19971 482 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 OPRD1P41143 372 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 ABCG1P45844 678 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 CDR1P51861 262 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 RAC1P63000 192 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 ZNF33AQ06730 810 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 KCNB1Q14721 858 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 NOLC1Q14978 699 aaKnown RBP eCLIP12.98□□□□□ -0.33
HLA-F-230ENST00000606273 BMT2Q1RMZ1 405 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 ISM2Q6H9L7 571 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 DSTYKQ6XUX3 929 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 ALLCQ8N6M5 410 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 TXNDC5Q8NBS9 432 aaKnown RBP12.98□□□□□ -0.33
HLA-F-230ENST00000606273 PIP4K2CQ8TBX8 421 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 ATP2A3Q93084 1043 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 CBWD1Q9BRT8 395 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 LINC00597Q9H2U6 94 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 MAPK8IP1Q9UQF2 711 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 KALRNO60229 2985 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
HLA-F-230ENST00000606273 BMP6P22004 513 aa12.97□□□□□ -0.33
HLA-F-230ENST00000606273 SCP2P22307 547 aa12.97□□□□□ -0.33
HLA-F-230ENST00000606273 ITPKBP27987 946 aa12.97□□□□□ -0.33
HLA-F-230ENST00000606273 LRPAP1P30533 357 aa12.97□□□□□ -0.33
HLA-F-230ENST00000606273 MATR3P43243 847 aaKnown RBP eCLIP12.97□□□□□ -0.33
HLA-F-230ENST00000606273 IFNAR2P48551 515 aa12.97□□□□□ -0.33
HLA-F-230ENST00000606273 RPL6Q02878 288 aaKnown RBP12.97□□□□□ -0.33
HLA-F-230ENST00000606273 ALCAMQ13740 583 aa12.97□□□□□ -0.33
HLA-F-230ENST00000606273 ZBTB6Q15916 424 aa12.97□□□□□ -0.33
HLA-F-230ENST00000606273 CRELD2Q6UXH1 353 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms