RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SLC30A5Q8TAD4 765 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 GDAP1Q8TB36 358 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PYROXD1Q8WU10 500 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF75CPQ92670 426 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 STMN2Q93045 179 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 ATG4CQ96DT6 458 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 LRGUKQ96M69 825 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 NLRP4Q96MN2 994 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 CRAMP1Q96RY5 1269 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 SPATA25Q9BR10 227 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 SIKE1Q9BRV8 207 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 AP1M1Q9BXS5 423 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 TDRD1Q9BXT4 1180 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 RTFDC1Q9BY42 306 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 MRPS26Q9BYN8 205 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 NT5C3AQ9H0P0 336 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 GANQ9H2C0 597 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 MRPL46Q9H2W6 279 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 RNF41Q9H4P4 317 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 LRRC19Q9H756 370 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF696Q9H7X3 374 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 USP29Q9HBJ7 922 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PALMDQ9NP74 551 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PFDN4Q9NQP4 134 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 RHBDL2Q9NX52 303 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 TAS2R1Q9NYW7 299 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 UVRAGQ9P2Y5 699 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 FETUBQ9UGM5 382 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 ARMCX3Q9UH62 379 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 SORCS3Q9UPU3 1222 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 HBS1LQ9Y450 684 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 BCORQ6W2J9 1755 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 ADAMTS20P59510 1910 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PKD1L3Q7Z443 1732 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 RTL9Q8NET4 1388 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 KIF13AQ9H1H9 1805 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 A0A087WZG4 1122 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TCRBV5S4A2TA0A5A2 114 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 GTPBP10A4D1E9 387 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 H0Y3Z8 333 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 H0YJX3 145 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 H3BNX3 289 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 GOLGA8TH3BQL2 631 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 GYG2O15488 501 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 PRICKLE3O43900 615 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 RNASEH1O60930 286 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 CLASP2O75122 1294 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 KRT36O76013 467 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TM7SF2O76062 418 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 PDE5AO76074 875 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 MTA2O94776 668 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ATE1O95260 518 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 FGGP02679 453 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 SPATA31D3P0C874 917 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 UBTFL6P0CB48 400 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZCCHC18P0CG32 403 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 GOLGA8HP0CJ92 632 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 SMIM18P0DKX4 95 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 NAT1P18440 290 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 POLR2EP19388 210 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TACR1P25103 407 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 UBA7P41226 1012 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 GRIA2P42262 883 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 RPL21P46778 160 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 VPS41P49754 854 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 NR1H2P55055 460 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 NUP107P57740 925 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ARPC4P59998 168 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TJP1Q07157 1748 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 CDC16Q13042 620 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 STK4Q13043 487 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZBTB17Q13105 803 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 RASGRF1Q13972 1273 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TBCCQ15814 346 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ASIC2Q16515 512 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 KYNUQ16719 465 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF829Q3KNS6 432 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 CERKLQ49MI3 558 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANKRD20A4Q4UJ75 823 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TAF1BQ53T94 588 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 C6orf163Q5TEZ5 329 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 FBXL19Q6PCT2 694 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 KLHDC10Q6PID8 442 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 HHIPL2Q6UWX4 724 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 LMBR1LQ6UX01 489 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 MFSD6Q6ZSS7 791 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 SPATA31D4Q6ZUB0 917 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 CENPUQ71F23 418 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 EPM2AIP1Q7L775 607 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 NLRP9Q7RTR0 991 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 DAAM2Q86T65 1068 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 PATL1Q86TB9 770 aaKnown RBP4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 VPS36Q86VN1 386 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 LRRC6Q86X45 466 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRIM59Q8IWR1 403 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 PEX5LQ8IYB4 626 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 EXOC8Q8IYI6 725 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 IFNL3Q8IZI9 196 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF654Q8IZM8 581 aa4.25□□□□□ -1.73
HMGB1P50-201ENST00000605814 VPS52Q8N1B4 723 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms