RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 GPR179Q6PRD1 2367 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 SLC12A8A0AV02 714 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 E5RJQ4 531 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 TRIM24O15164 1050 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 EPHB6O15197 1021 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 TULP3O75386 442 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 KAT7O95251 611 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 PENKP01210 267 aaPredicted RBP18.29■□□□□ 0.52
IRF3-230ENST00000601809 CORO1AP31146 461 aaKnown RBP18.29■□□□□ 0.52
IRF3-230ENST00000601809 KIR2DL1P43626 348 aaPredicted RBP18.29■□□□□ 0.52
IRF3-230ENST00000601809 ACADSBP45954 432 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 COPB1P53618 953 aaKnown RBP18.29■□□□□ 0.52
IRF3-230ENST00000601809 PDCLQ13371 301 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 ZC3H14Q6PJT7 736 aaKnown RBP18.29■□□□□ 0.52
IRF3-230ENST00000601809 BEND5Q7L4P6 421 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 FMNL3Q8IVF7 1028 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 SCUBE3Q8IX30 993 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 RPLP0P6Q8NHW5 317 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 DDX1Q92499 740 aaKnown RBP18.29■□□□□ 0.52
IRF3-230ENST00000601809 NKD2Q969F2 451 aaPredicted RBP18.29■□□□□ 0.52
IRF3-230ENST00000601809 PLD4Q96BZ4 506 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 PIWIL1Q96J94 861 aaKnown RBP18.29■□□□□ 0.52
IRF3-230ENST00000601809 BPIFA3Q9BQP9 254 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 LSM14BQ9BX40 385 aaKnown RBP18.29■□□□□ 0.52
IRF3-230ENST00000601809 DCLK3Q9C098 648 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 SFMBT1Q9UHJ3 866 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 ZNF510Q9Y2H8 683 aa18.29■□□□□ 0.52
IRF3-230ENST00000601809 RIF1Q5UIP0 2472 aaKnown RBP18.28■□□□□ 0.52
IRF3-230ENST00000601809 GFRA3O60609 400 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 HMBSP08397 361 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 CISD3P0C7P0 127 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 USP8P40818 1118 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 GRIA2P42262 883 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 EIF4EBP2Q13542 120 aaPredicted RBP18.28■□□□□ 0.52
IRF3-230ENST00000601809 FYB2Q5VWT5 728 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 CAVIN1Q6NZI2 390 aaKnown RBP18.28■□□□□ 0.52
IRF3-230ENST00000601809 RSRC2Q7L4I2 434 aaKnown RBP18.28■□□□□ 0.52
IRF3-230ENST00000601809 SYT13Q7L8C5 426 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 CPXM2Q8N436 756 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 CPXM1Q96SM3 734 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 MIS12Q9H081 205 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 EPC1Q9H2F5 836 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 STRIP2Q9ULQ0 834 aa18.28■□□□□ 0.52
IRF3-230ENST00000601809 GVINP1Q7Z2Y8 2422 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 LGALS16A8MUM7 142 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.27■□□□□ 0.52
IRF3-230ENST00000601809 F8VZ95 297 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 MSI1O43347 362 aaKnown RBP18.27■□□□□ 0.52
IRF3-230ENST00000601809 ATG13O75143 517 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 TYRP14679 529 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 CDH5P33151 784 aaPredicted RBP18.27■□□□□ 0.52
IRF3-230ENST00000601809 NRLP54845 237 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 JAM2P57087 298 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 PTK2Q05397 1052 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 PPP2R5DQ14738 602 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 KLHL40Q2TBA0 621 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 ANO6Q4KMQ2 910 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 RNF43Q68DV7 783 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 TPGS1Q6ZTW0 290 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 DHX40Q8IX18 779 aaKnown RBP18.27■□□□□ 0.52
IRF3-230ENST00000601809 AOPEPQ8N6M6 819 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 NAT16Q8N8M0 369 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 TERB1Q8NA31 727 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 STK33Q9BYT3 514 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 ARHGEF4Q9NR80 690 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 FAM186AA6NE01 2351 aa18.27■□□□□ 0.52
IRF3-230ENST00000601809 MYO18AQ92614 2054 aaKnown RBP18.26■□□□□ 0.51
IRF3-230ENST00000601809 CCDC163A0A0D9SF12 145 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 NEDD8-MDP1E9PL57 170 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 LATS1O95835 1130 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 IGLV3-25P01717 112 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 LMNAP02545 664 aaKnown RBP18.26■□□□□ 0.51
IRF3-230ENST00000601809 APODP05090 189 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 ATP1A3P13637 1013 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 HNRNPLP14866 589 aaKnown RBP eCLIP18.26■□□□□ 0.51
IRF3-230ENST00000601809 CYP11B1P15538 503 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 TNFRSF4P43489 277 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 FNTBP49356 437 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 MRPS21P82921 87 aaKnown RBP18.26■□□□□ 0.51
IRF3-230ENST00000601809 KDSRQ06136 332 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 RING1Q06587 406 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 ANO4Q32M45 955 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 PTPN20Q4JDL3 420 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 EMC10Q5UCC4 262 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 WDR5BQ86VZ2 330 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 DENND1CQ8IV53 801 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 PASD1Q8IV76 773 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 IL17RCQ8NAC3 791 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 DQX1Q8TE96 717 aaKnown RBP18.26■□□□□ 0.51
IRF3-230ENST00000601809 RNF139Q8WU17 664 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 SLC39A13Q96H72 371 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 ERGIC2Q96RQ1 377 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 BBS2Q9BXC9 721 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 ST7Q9NRC1 585 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 WDR35Q9P2L0 1181 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 NAALADL1Q9UQQ1 740 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 STARD13Q9Y3M8 1113 aa18.26■□□□□ 0.51
IRF3-230ENST00000601809 PES1O00541 588 aaKnown RBP18.25■□□□□ 0.51
IRF3-230ENST00000601809 SART1O43290 800 aaKnown RBP18.25■□□□□ 0.51
IRF3-230ENST00000601809 HRO43593 1189 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms