RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 ZNF670Q9BS34 389 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 HERPUD2Q9BSE4 406 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 CALN1Q9BXU9 219 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 EPB41L5Q9HCM4 733 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 MRPL17Q9NRX2 175 aaKnown RBP14.26□□□□□ -0.13
IRF3-229ENST00000601373 FNIP2Q9P278 1114 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 RCOR3Q9P2K3 495 aaPredicted RBP14.26□□□□□ -0.13
IRF3-229ENST00000601373 FZD10Q9ULW2 581 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 AP4E1Q9UPM8 1137 aa14.26□□□□□ -0.13
IRF3-229ENST00000601373 PRUNE2Q8WUY3 3088 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.25□□□□□ -0.13
IRF3-229ENST00000601373 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.25□□□□□ -0.13
IRF3-229ENST00000601373 BHMG1C9JSJ3 638 aaPredicted RBP14.25□□□□□ -0.13
IRF3-229ENST00000601373 TTI1O43156 1089 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 CST8O60676 142 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 ZFXP17010 805 aaPredicted RBP14.25□□□□□ -0.13
IRF3-229ENST00000601373 PTGIRP43119 386 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 CLCN6P51797 869 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 ZNF135P52742 658 aaPredicted RBP14.25□□□□□ -0.13
IRF3-229ENST00000601373 EPHB4P54760 987 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 DRG2P55039 364 aaKnown RBP14.25□□□□□ -0.13
IRF3-229ENST00000601373 GUCY2DQ02846 1103 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 CUL1Q13616 776 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 DPYSL3Q14195 570 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 LLGL1Q15334 1064 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 RAB6CQ53S08 254 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 OTUD1Q5VV17 481 aaPredicted RBP14.25□□□□□ -0.13
IRF3-229ENST00000601373 ANKS1BQ7Z6G8 1248 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 RFX6Q8HWS3 928 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 VPS52Q8N1B4 723 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.25□□□□□ -0.13
IRF3-229ENST00000601373 RNF139Q8WU17 664 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 C1orf54Q8WWF1 131 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 RNF157Q96PX1 679 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 RAB6CQ9H0N0 254 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 DHX35Q9H5Z1 703 aaKnown RBP14.25□□□□□ -0.13
IRF3-229ENST00000601373 FAM204AQ9H8W3 233 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 PCDH18Q9HCL0 1135 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 ARFGAP3Q9NP61 516 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 FAM114A2Q9NRY5 505 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 DRG1Q9Y295 367 aaKnown RBP14.25□□□□□ -0.13
IRF3-229ENST00000601373 SLC27A5Q9Y2P5 690 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 RWDD3Q9Y3V2 267 aa14.25□□□□□ -0.13
IRF3-229ENST00000601373 MUC3AQ02505 3323 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 C2CD2LO14523 706 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 ADAM12O43184 909 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 FGF18O76093 207 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 VNN2O95498 520 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 ECEL1O95672 775 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 GAS8O95995 478 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 CD48P09326 243 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 ATF2P15336 505 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 ATP2A2P16615 1042 aaKnown RBP14.24□□□□□ -0.13
IRF3-229ENST00000601373 COL9A1P20849 921 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 L1CAMP32004 1257 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 ADRA1BP35368 520 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 CXCR3P49682 368 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 GPR15P49685 360 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 MRPS25P82663 173 aaKnown RBP14.24□□□□□ -0.13
IRF3-229ENST00000601373 SCAPQ12770 1279 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 IFRD2Q12894 506 aaPredicted RBP14.24□□□□□ -0.13
IRF3-229ENST00000601373 NME3Q13232 169 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 ZC3H12AQ5D1E8 599 aaKnown RBP14.24□□□□□ -0.13
IRF3-229ENST00000601373 EFHC2Q5JST6 749 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 TTC27Q6P3X3 843 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 SCD5Q86SK9 330 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 FAM131BQ86XD5 332 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 JAMLQ86YT9 394 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 ATXN2LQ8WWM7 1075 aaKnown RBP14.24□□□□□ -0.13
IRF3-229ENST00000601373 SEC14L1Q92503 715 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 EDEM1Q92611 657 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 FBXO32Q969P5 355 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 FAF2Q96CS3 445 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 ERP44Q9BS26 406 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 ADAM33Q9BZ11 813 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 WDCPQ9H6R7 721 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 RXFP1Q9HBX9 757 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 TLR8Q9NR97 1041 aaKnown RBP14.24□□□□□ -0.13
IRF3-229ENST00000601373 DDIT4Q9NX09 232 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 CLIC5Q9NZA1 410 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.24□□□□□ -0.136e-9■■■□□ 17.9
IRF3-229ENST00000601373 CXXC1Q9P0U4 656 aaPredicted RBP14.24□□□□□ -0.13
IRF3-229ENST00000601373 FBXW11Q9UKB1 542 aa14.24□□□□□ -0.13
IRF3-229ENST00000601373 PTPRSQ13332 1948 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 SLC38A8A6NNN8 435 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 H3BRJ5 948 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 APOC4-APOC2K7ER74 178 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 LIASO43766 372 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 TLL1O43897 1013 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 ZMYND10O75800 440 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 IGLV3-25P01717 112 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 APOC2P02655 101 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 CTSAP10619 480 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 RPL17P18621 184 aaKnown RBP14.23□□□□□ -0.13
IRF3-229ENST00000601373 TGM2P21980 687 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 IL4RP24394 825 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 ELF1P32519 619 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 ARL4AP40617 200 aa14.23□□□□□ -0.13
IRF3-229ENST00000601373 ATXN1P54253 815 aaKnown RBP14.23□□□□□ -0.13
IRF3-229ENST00000601373 PITX1P78337 314 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms