RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 FAM92AA1XBS5 289 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 LIASO43766 372 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 RPL17P18621 184 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 IL4RP24394 825 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 YWHAQP27348 245 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 CARSP49589 748 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 ANKRD20A8PQ5CZ79 823 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 DUPD1Q68J44 220 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 VPS52Q8N1B4 723 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 ZNF461Q8TAF7 563 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 FAF2Q96CS3 445 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 RAD9AQ99638 391 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 TRIM51Q9BSJ1 452 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 FAM204AQ9H8W3 233 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 WDR6Q9NNW5 1121 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 FAM114A2Q9NRY5 505 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.35■□□□□ 0.531e-8■■■■■ 45.1
SHKBP1-224ENST00000600718 COX16Q9P0S2 106 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 FBXW11Q9UKB1 542 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 ESYT3A0FGR9 886 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 ABLIM3O94929 683 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 ADRA1BP35368 520 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 CXCR3P49682 368 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 HERC6Q8IVU3 1022 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 ADAM32Q8TC27 787 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 DQX1Q8TE96 717 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 CLP1Q92989 425 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 PRDM16Q9HAZ2 1276 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 MTMR10Q9NXD2 777 aa18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 RCOR3Q9P2K3 495 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-224ENST00000600718 COL4A4P53420 1690 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 A0A1W2PQH9 124 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 APOC4-APOC2K7ER74 178 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 SOAT2O75908 522 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 GAS8O95995 478 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 APOC2P02655 101 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 MYBL2P10244 700 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 SYN1P17600 705 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 USP46P62068 366 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 DYNLT1P63172 113 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 BYSLQ13895 437 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 ARL13BQ3SXY8 428 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 PPP6R3Q5H9R7 873 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 EFHC2Q5JST6 749 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 RNF139Q8WU17 664 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 NKD2Q969F2 451 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 KCTD15Q96SI1 283 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 MTIF3Q9H2K0 278 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 NMUR1Q9HB89 426 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 MRPL17Q9NRX2 175 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 SSX2IPQ9Y2D8 614 aa18.34■□□□□ 0.53
SHKBP1-224ENST00000600718 FGF18O76093 207 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 SEC31AO94979 1220 aaKnown RBP18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 IGLV3-25P01717 112 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 PSEN1P49768 467 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 SCAPQ12770 1279 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 RAB33AQ14088 237 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 PPP1R7Q15435 360 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 TRADDQ15628 312 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 TAC4Q86UU9 113 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 SLC35B2Q8TB61 432 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 ACTL9Q8TC94 416 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 SP7Q8TDD2 431 aaPredicted RBP18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 AENQ8WTP8 325 aaKnown RBP18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 FBXO32Q969P5 355 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 CCDC114Q96M63 670 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 FAM118BQ9BPY3 351 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 LBHD1Q9BQE6 289 aaPredicted RBP18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 WDCPQ9H6R7 721 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 FNIP2Q9P278 1114 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 DNPEPQ9ULA0 475 aa18.33■□□□□ 0.53
SHKBP1-224ENST00000600718 DAPK3O43293 454 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 ATP8B1O43520 1251 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 LINC00271P0C7V0 271 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 ATF2P15336 505 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 ZFXP17010 805 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 ARL4AP40617 200 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 VCPP55072 806 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 OTUD4Q01804 1114 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 CREMQ03060 361 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 EIF4EBP2Q13542 120 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 SLC9A4Q6AI14 798 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 PCDH19Q8TAB3 1148 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 GPR152Q8TDT2 470 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 HAUS1Q96CS2 278 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 SMOC2Q9H3U7 446 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 ZNF446Q9NWS9 450 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 CLIC5Q9NZA1 410 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 GMIPQ9P107 970 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 MAFFQ9ULX9 164 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 NFU1Q9UMS0 254 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 ZNF148Q9UQR1 794 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 PTPRSQ13332 1948 aa18.33■□□□□ 0.52
SHKBP1-224ENST00000600718 SLC38A8A6NNN8 435 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 APOL1O14791 398 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 ITGAVP06756 1048 aa18.32■□□□□ 0.52
SHKBP1-224ENST00000600718 ATP2A2P16615 1042 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms