RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 SAP25Q8TEE9 199 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 P2RY11Q96G91 374 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 FAM84AQ96KN4 292 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 ZNF578Q96N58 590 aaPredicted RBP18.65■□□□□ 0.58
SSBP4-207ENST00000600244 TRIM4Q9C037 500 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 ITGA11Q9UKX5 1188 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 CLCA2Q9UQC9 943 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 SLC27A6Q9Y2P4 619 aa18.65■□□□□ 0.58
SSBP4-207ENST00000600244 SYNCRIPO60506 623 aaKnown RBP18.64■□□□□ 0.57
SSBP4-207ENST00000600244 ZDHHC11BP0C7U3 371 aa18.64■□□□□ 0.57
SSBP4-207ENST00000600244 IRF1P10914 325 aa18.64■□□□□ 0.57
SSBP4-207ENST00000600244 RBP5P82980 135 aa18.64■□□□□ 0.57
SSBP4-207ENST00000600244 ZRSR1Q15695 479 aaKnown RBP18.64■□□□□ 0.57
SSBP4-207ENST00000600244 DHX40Q8IX18 779 aaKnown RBP18.64■□□□□ 0.57
SSBP4-207ENST00000600244 NUP93Q8N1F7 819 aa18.64■□□□□ 0.57
SSBP4-207ENST00000600244 CACTINQ8WUQ7 758 aaKnown RBP18.64■□□□□ 0.57
SSBP4-207ENST00000600244 FBXO32Q969P5 355 aa18.64■□□□□ 0.57
SSBP4-207ENST00000600244 PLIN2Q99541 437 aa18.64■□□□□ 0.57
SSBP4-207ENST00000600244 ELF4Q99607 663 aaPredicted RBP18.64■□□□□ 0.57
SSBP4-207ENST00000600244 IKZF4Q9H2S9 585 aa18.64■□□□□ 0.57
SSBP4-207ENST00000600244 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
SSBP4-207ENST00000600244 NME7Q9Y5B8 376 aa18.64■□□□□ 0.57
SSBP4-207ENST00000600244 CKAP5Q14008 2032 aa18.63■□□□□ 0.57
SSBP4-207ENST00000600244 VILLO15195 856 aa18.63■□□□□ 0.57
SSBP4-207ENST00000600244 ITGAVP06756 1048 aa18.63■□□□□ 0.57
SSBP4-207ENST00000600244 WARSP23381 471 aaKnown RBP18.63■□□□□ 0.57
SSBP4-207ENST00000600244 TOB1P50616 345 aaPredicted RBP18.63■□□□□ 0.57
SSBP4-207ENST00000600244 INSM1Q01101 510 aaPredicted RBP18.63■□□□□ 0.57
SSBP4-207ENST00000600244 IFRD2Q12894 506 aaPredicted RBP18.63■□□□□ 0.57
SSBP4-207ENST00000600244 EID2Q8N6I1 236 aa18.63■□□□□ 0.57
SSBP4-207ENST00000600244 PARVGQ9HBI0 331 aa18.63■□□□□ 0.57
SSBP4-207ENST00000600244 IL37Q9NZH6 218 aa18.63■□□□□ 0.57
SSBP4-207ENST00000600244 ANKMY1Q9P2S6 941 aa18.63■□□□□ 0.57
SSBP4-207ENST00000600244 FLNCQ14315 2725 aa18.63■□□□□ 0.57
SSBP4-207ENST00000600244 ARID1BQ8NFD5 2236 aaPredicted RBP18.62■□□□□ 0.57
SSBP4-207ENST00000600244 RTN3O95197 1032 aaPredicted RBP18.62■□□□□ 0.57
SSBP4-207ENST00000600244 PDCP20941 246 aa18.62■□□□□ 0.57
SSBP4-207ENST00000600244 SYT1P21579 422 aa18.62■□□□□ 0.57
SSBP4-207ENST00000600244 ABCD1P33897 745 aa18.62■□□□□ 0.57
SSBP4-207ENST00000600244 ANP32AP39687 249 aaKnown RBP18.62■□□□□ 0.57
SSBP4-207ENST00000600244 PRPHP41219 470 aa18.62■□□□□ 0.57
SSBP4-207ENST00000600244 GEN1Q17RS7 908 aa18.62■□□□□ 0.57
SSBP4-207ENST00000600244 MDH1BQ5I0G3 518 aa18.62■□□□□ 0.57
SSBP4-207ENST00000600244 DTHD1Q6ZMT9 781 aa18.62■□□□□ 0.57
SSBP4-207ENST00000600244 CACUL1Q86Y37 369 aa18.62■□□□□ 0.57
SSBP4-207ENST00000600244 BRSK2Q8IWQ3 736 aa18.62■□□□□ 0.57
SSBP4-207ENST00000600244 KLF16Q9BXK1 252 aaPredicted RBP18.62■□□□□ 0.57
SSBP4-207ENST00000600244 SPTAN1Q13813 2472 aaKnown RBP18.62■□□□□ 0.57
SSBP4-207ENST00000600244 TEP1Q99973 2627 aaKnown RBP18.61■□□□□ 0.57
SSBP4-207ENST00000600244 DXOO77932 396 aaKnown RBP18.61■□□□□ 0.57
SSBP4-207ENST00000600244 FAM13AO94988 1023 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 KRT19P08727 400 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 PRKCHP24723 683 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 MFAP3P55082 362 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 ZNF234Q14588 700 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 TMEM119Q4V9L6 283 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 HS2ST1Q7LGA3 356 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 ADAT2Q7Z6V5 191 aaKnown RBP18.61■□□□□ 0.57
SSBP4-207ENST00000600244 RBBP8NLQ8NC74 664 aaPredicted RBP18.61■□□□□ 0.57
SSBP4-207ENST00000600244 ZSWIM2Q8NEG5 633 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 POMGNT1Q8WZA1 660 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 DPH1Q9BZG8 443 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 ZNF518BQ9C0D4 1074 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 ST6GALNAC4Q9H4F1 302 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.61■□□□□ 0.57
SSBP4-207ENST00000600244 MYH10P35580 1976 aa18.61■□□□□ 0.57
SSBP4-207ENST00000600244 NOTCH2Q04721 2471 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 PTPRJQ12913 1337 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 FAM92AA1XBS5 289 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 KLK10O43240 276 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 SEMA4FO95754 770 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 HSP90AA1P07900 732 aaKnown RBP18.6■□□□□ 0.57
SSBP4-207ENST00000600244 GP1BBP13224 206 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 PGFP49763 221 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 CDH8P55286 799 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 C21orf59P57076 290 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 RACK1P63244 317 aaKnown RBP18.6■□□□□ 0.57
SSBP4-207ENST00000600244 POSTNQ15063 836 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 ZNF574Q6ZN55 896 aaPredicted RBP18.6■□□□□ 0.57
SSBP4-207ENST00000600244 OR2T3Q8NH03 318 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 SCAMP5Q8TAC9 235 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 KCNE4Q8WWG9 221 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 FAM213AQ9BRX8 229 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 ACE2Q9BYF1 805 aaPredicted RBP18.6■□□□□ 0.57
SSBP4-207ENST00000600244 FAM117AQ9C073 453 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 ELOVL4Q9GZR5 314 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 PLK2Q9NYY3 685 aa18.6■□□□□ 0.57
SSBP4-207ENST00000600244 NOL7Q9UMY1 257 aaKnown RBP18.6■□□□□ 0.57
SSBP4-207ENST00000600244 K7ENP7 123 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 FSBPO95073 299 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 MT-CO3P00414 261 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 CKMT2P17540 419 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 ABCB4P21439 1286 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 ERVPABLB-1P60509 514 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 NFATC3Q12968 1075 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 KIAA1614Q5VZ46 1190 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 INO80CQ6PI98 192 aaPredicted RBP18.59■□□□□ 0.57
SSBP4-207ENST00000600244 GPBP1Q86WP2 473 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 LSMEM2Q8N112 164 aa18.59■□□□□ 0.57
SSBP4-207ENST00000600244 UCMAQ8WVF2 138 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms