RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 CFAP54Q96N23 3096 aa29.44■■■□□ 2.3
ZNF558-206ENST00000599938 SART1O43290 800 aaKnown RBP29.43■■■□□ 2.3
ZNF558-206ENST00000599938 TYRP14679 529 aa29.43■■■□□ 2.3
ZNF558-206ENST00000599938 RPL34P49207 117 aaKnown RBP29.43■■■□□ 2.3
ZNF558-206ENST00000599938 PTK2Q05397 1052 aa29.43■■■□□ 2.3
ZNF558-206ENST00000599938 TYRO3Q06418 890 aa29.43■■■□□ 2.3
ZNF558-206ENST00000599938 PREPLQ4J6C6 727 aaPredicted RBP29.43■■■□□ 2.3
ZNF558-206ENST00000599938 C2orf27AQ580R0 203 aa29.43■■■□□ 2.3
ZNF558-206ENST00000599938 DPY19L2P1Q6NXN4 242 aa29.43■■■□□ 2.3
ZNF558-206ENST00000599938 DENND1CQ8IV53 801 aa29.43■■■□□ 2.3
ZNF558-206ENST00000599938 USP33Q8TEY7 942 aa29.43■■■□□ 2.3
ZNF558-206ENST00000599938 STK32AQ8WU08 396 aa29.43■■■□□ 2.3
ZNF558-206ENST00000599938 BHMTQ93088 406 aa29.43■■■□□ 2.3
ZNF558-206ENST00000599938 XPO6Q96QU8 1125 aaKnown RBP29.43■■■□□ 2.3
ZNF558-206ENST00000599938 DNAJC17Q9NVM6 304 aaKnown RBP29.43■■■□□ 2.3
ZNF558-206ENST00000599938 SFMBT1Q9UHJ3 866 aa29.43■■■□□ 2.3
ZNF558-206ENST00000599938 FOXN3O00409 490 aaPredicted RBP29.42■■■□□ 2.3
ZNF558-206ENST00000599938 MSI1O43347 362 aaKnown RBP29.42■■■□□ 2.3
ZNF558-206ENST00000599938 CACNG3O60359 315 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 HOXA6P31267 233 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 HOXC13P31276 330 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 PDCLQ13371 301 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 KLHDC7AQ5VTJ3 777 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 MSANTD2Q6P1R3 559 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 SYT13Q7L8C5 426 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 LONP2Q86WA8 852 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 PASD1Q8IV76 773 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 PHTF2Q8N3S3 785 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 FAM149B1Q96BN6 582 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 HHIPQ96QV1 700 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 EPC1Q9H2F5 836 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 CYTH4Q9UIA0 394 aa29.42■■■□□ 2.3
ZNF558-206ENST00000599938 AGO1Q9UL18 857 aaKnown RBP29.42■■■□□ 2.3
ZNF558-206ENST00000599938 CHKAP35790 457 aa29.41■■■□□ 2.3
ZNF558-206ENST00000599938 DMC1Q14565 340 aa29.41■■■□□ 2.3
ZNF558-206ENST00000599938 TRIP4Q15650 581 aaPredicted RBP29.41■■■□□ 2.3
ZNF558-206ENST00000599938 GRAMD4Q6IC98 578 aa29.41■■■□□ 2.3
ZNF558-206ENST00000599938 CAVIN1Q6NZI2 390 aaKnown RBP29.41■■■□□ 2.3
ZNF558-206ENST00000599938 SLC47A2Q86VL8 602 aa29.41■■■□□ 2.3
ZNF558-206ENST00000599938 SCUBE3Q8IX30 993 aa29.41■■■□□ 2.3
ZNF558-206ENST00000599938 TERB1Q8NA31 727 aa29.41■■■□□ 2.3
ZNF558-206ENST00000599938 SUMF1Q8NBK3 374 aa29.41■■■□□ 2.3
ZNF558-206ENST00000599938 ANKRD20A12PQ8NF67 263 aa29.41■■■□□ 2.3
ZNF558-206ENST00000599938 SLC4A5Q9BY07 1137 aa29.41■■■□□ 2.3
ZNF558-206ENST00000599938 SMG5Q9UPR3 1016 aaKnown RBP29.41■■■□□ 2.3
ZNF558-206ENST00000599938 TBC1D3BA6NDS4 549 aa29.4■■■□□ 2.3
ZNF558-206ENST00000599938 ANTXRLA6NF34 631 aa29.4■■■□□ 2.3
ZNF558-206ENST00000599938 E5RJQ4 531 aa29.4■■■□□ 2.3
ZNF558-206ENST00000599938 UCHL3P15374 230 aa29.4■■■□□ 2.3
ZNF558-206ENST00000599938 HARS2P49590 506 aaKnown RBP29.4■■■□□ 2.3
ZNF558-206ENST00000599938 DRAP1Q14919 205 aaPredicted RBP29.4■■■□□ 2.3
ZNF558-206ENST00000599938 FKBP15Q5T1M5 1219 aa29.4■■■□□ 2.3
ZNF558-206ENST00000599938 FAM71AQ8IYT1 594 aa29.4■■■□□ 2.3
ZNF558-206ENST00000599938 PCDHGC3Q9UN70 934 aa29.4■■■□□ 2.3
ZNF558-206ENST00000599938 ZNF292O60281 2723 aa29.4■■■□□ 2.3
ZNF558-206ENST00000599938 CLCN1P35523 988 aa29.39■■■□□ 2.3
ZNF558-206ENST00000599938 PXNP49023 591 aaPredicted RBP29.39■■■□□ 2.3
ZNF558-206ENST00000599938 MRPS21P82921 87 aaKnown RBP29.39■■■□□ 2.3
ZNF558-206ENST00000599938 WDR5BQ86VZ2 330 aa29.39■■■□□ 2.3
ZNF558-206ENST00000599938 HINFPQ9BQA5 517 aa29.39■■■□□ 2.3
ZNF558-206ENST00000599938 PLK2Q9NYY3 685 aa29.39■■■□□ 2.3
ZNF558-206ENST00000599938 TRIM24O15164 1050 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 PAPSS1O43252 624 aaPredicted RBP29.38■■■□□ 2.29
ZNF558-206ENST00000599938 NCAM1P13591 858 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 KRT9P35527 623 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 TIE1P35590 1138 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 TNFRSF4P43489 277 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 BPIFB4P59827 614 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 C10orf76Q5T2E6 689 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 NUDT18Q6ZVK8 323 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 TMEM110Q86TL2 294 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 CCDC33Q8N5R6 958 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 CAMKK1Q8N5S9 505 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 AOPEPQ8N6M6 819 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 TRIM62Q9BVG3 475 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 NAA15Q9BXJ9 866 aaKnown RBP29.38■■■□□ 2.29
ZNF558-206ENST00000599938 MMP17Q9ULZ9 603 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 CEP83Q9Y592 693 aa29.38■■■□□ 2.29
ZNF558-206ENST00000599938 A0A0A0MRY4 1105 aa29.37■■■□□ 2.29
ZNF558-206ENST00000599938 APBB3O95704 486 aa29.37■■■□□ 2.29
ZNF558-206ENST00000599938 COPB1P53618 953 aaKnown RBP29.37■■■□□ 2.29
ZNF558-206ENST00000599938 CPXM2Q8N436 756 aa29.37■■■□□ 2.29
ZNF558-206ENST00000599938 ALLCQ8N6M5 410 aa29.37■■■□□ 2.29
ZNF558-206ENST00000599938 C1orf131Q8NDD1 294 aaKnown RBP29.37■■■□□ 2.29
ZNF558-206ENST00000599938 NOX5Q96PH1 765 aa29.37■■■□□ 2.29
ZNF558-206ENST00000599938 NAT10Q9H0A0 1025 aaKnown RBP29.37■■■□□ 2.29
ZNF558-206ENST00000599938 PLCB1Q9NQ66 1216 aa29.37■■■□□ 2.29
ZNF558-206ENST00000599938 KLF8O95600 359 aaPredicted RBP29.36■■■□□ 2.29
ZNF558-206ENST00000599938 PENKP01210 267 aaPredicted RBP29.36■■■□□ 2.29
ZNF558-206ENST00000599938 CYBBP04839 570 aa29.36■■■□□ 2.29
ZNF558-206ENST00000599938 CHRM1P11229 460 aaPredicted RBP29.36■■■□□ 2.29
ZNF558-206ENST00000599938 CNR2P34972 360 aa29.36■■■□□ 2.29
ZNF558-206ENST00000599938 KIR2DL1P43626 348 aaPredicted RBP29.36■■■□□ 2.29
ZNF558-206ENST00000599938 DGKGP49619 791 aa29.36■■■□□ 2.29
ZNF558-206ENST00000599938 SRSF5Q13243 272 aaKnown RBP29.36■■■□□ 2.29
ZNF558-206ENST00000599938 NCAPHQ15003 741 aa29.36■■■□□ 2.29
ZNF558-206ENST00000599938 HSF5Q4G112 596 aaPredicted RBP29.36■■■□□ 2.29
ZNF558-206ENST00000599938 ANO6Q4KMQ2 910 aa29.36■■■□□ 2.29
ZNF558-206ENST00000599938 FYB2Q5VWT5 728 aa29.36■■■□□ 2.29
ZNF558-206ENST00000599938 PRR23BQ6ZRT6 265 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms